Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.27■□□□□ 0.84
KNTC1P50748 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.27■□□□□ 0.84
KNTC1P50748 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.27■□□□□ 0.84
KNTC1P50748 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
KNTC1P50748 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KNTC1P50748 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
KNTC1P50748 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
KNTC1P50748 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
KNTC1P50748 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KNTC1P50748 AC010980.2-201ENST00000587099 1412 ntBASIC20.26■□□□□ 0.83
KNTC1P50748 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KNTC1P50748 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KNTC1P50748 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KNTC1P50748 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KNTC1P50748 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KNTC1P50748 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
KNTC1P50748 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KNTC1P50748 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KNTC1P50748 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KNTC1P50748 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.26■□□□□ 0.83
KNTC1P50748 AC120498.10-201ENST00000621827 505 ntBASIC20.26■□□□□ 0.83
KNTC1P50748 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KNTC1P50748 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.25■□□□□ 0.83
KNTC1P50748 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KNTC1P50748 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.25■□□□□ 0.83
KNTC1P50748 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KNTC1P50748 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KNTC1P50748 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.25■□□□□ 0.83
KNTC1P50748 UBE2SP1-201ENST00000450587 669 ntBASIC20.25■□□□□ 0.83
KNTC1P50748 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.25■□□□□ 0.83
KNTC1P50748 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KNTC1P50748 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.25■□□□□ 0.83
KNTC1P50748 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KNTC1P50748 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KNTC1P50748 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KNTC1P50748 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KNTC1P50748 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KNTC1P50748 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KNTC1P50748 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KNTC1P50748 AC093787.1-201ENST00000450396 207 ntBASIC20.25■□□□□ 0.83
KNTC1P50748 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KNTC1P50748 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KNTC1P50748 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KNTC1P50748 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KNTC1P50748 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KNTC1P50748 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.24■□□□□ 0.83
KNTC1P50748 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.24■□□□□ 0.83
KNTC1P50748 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KNTC1P50748 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
KNTC1P50748 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.24■□□□□ 0.83
KNTC1P50748 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.24■□□□□ 0.83
KNTC1P50748 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KNTC1P50748 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KNTC1P50748 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KNTC1P50748 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KNTC1P50748 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KNTC1P50748 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KNTC1P50748 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KNTC1P50748 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KNTC1P50748 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
KNTC1P50748 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
KNTC1P50748 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KNTC1P50748 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.23■□□□□ 0.83
KNTC1P50748 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KNTC1P50748 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.23■□□□□ 0.83
KNTC1P50748 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KNTC1P50748 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.23■□□□□ 0.83
KNTC1P50748 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KNTC1P50748 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KNTC1P50748 AC092068.2-201ENST00000590491 1708 ntBASIC20.23■□□□□ 0.83
KNTC1P50748 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.23■□□□□ 0.83
KNTC1P50748 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.23■□□□□ 0.83
KNTC1P50748 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.23■□□□□ 0.83
KNTC1P50748 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KNTC1P50748 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.23■□□□□ 0.83
KNTC1P50748 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
KNTC1P50748 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KNTC1P50748 AP006587.3-201ENST00000525742 1516 ntBASIC20.22■□□□□ 0.83
KNTC1P50748 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
KNTC1P50748 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
KNTC1P50748 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.22■□□□□ 0.83
KNTC1P50748 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KNTC1P50748 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KNTC1P50748 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KNTC1P50748 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.22■□□□□ 0.83
KNTC1P50748 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KNTC1P50748 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KNTC1P50748 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KNTC1P50748 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.22■□□□□ 0.83
KNTC1P50748 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.22■□□□□ 0.83
KNTC1P50748 AL591742.1-201ENST00000604433 565 ntBASIC20.22■□□□□ 0.83
KNTC1P50748 AC073648.6-201ENST00000641589 218 ntBASIC20.22■□□□□ 0.83
KNTC1P50748 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KNTC1P50748 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
KNTC1P50748 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KNTC1P50748 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KNTC1P50748 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KNTC1P50748 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KNTC1P50748 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KNTC1P50748 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms