Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBE2AP49459 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBE2AP49459 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBE2AP49459 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBE2AP49459 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBE2AP49459 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UBE2AP49459 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC13.41□□□□□ -0.26
UBE2AP49459 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBE2AP49459 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBE2AP49459 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBE2AP49459 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC13.4□□□□□ -0.26
UBE2AP49459 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC13.4□□□□□ -0.26
UBE2AP49459 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBE2AP49459 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBE2AP49459 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBE2AP49459 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBE2AP49459 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBE2AP49459 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBE2AP49459 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBE2AP49459 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBE2AP49459 AL136116.3-201ENST00000402907 1138 ntBASIC13.4□□□□□ -0.26
UBE2AP49459 HES6-206ENST00000409574 738 ntTSL 2 BASIC13.4□□□□□ -0.26
UBE2AP49459 OR2I1P-207ENST00000453522 948 ntBASIC13.4□□□□□ -0.26
UBE2AP49459 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC13.4□□□□□ -0.26
UBE2AP49459 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBE2AP49459 QDPR-206ENST00000508623 601 ntTSL 3 BASIC13.4□□□□□ -0.26
UBE2AP49459 AL138724.1-201ENST00000606771 1088 ntBASIC13.4□□□□□ -0.26
UBE2AP49459 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC13.4□□□□□ -0.26
UBE2AP49459 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC13.4□□□□□ -0.26
UBE2AP49459 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBE2AP49459 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBE2AP49459 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
UBE2AP49459 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
UBE2AP49459 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBE2AP49459 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBE2AP49459 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
UBE2AP49459 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC13.4□□□□□ -0.27
UBE2AP49459 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
UBE2AP49459 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC13.4□□□□□ -0.27
UBE2AP49459 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBE2AP49459 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBE2AP49459 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC13.39□□□□□ -0.27
UBE2AP49459 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBE2AP49459 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
UBE2AP49459 EI24-211ENST00000534546 1544 ntTSL 2 BASIC13.39□□□□□ -0.27
UBE2AP49459 USP45-205ENST00000472914 1617 ntTSL 5 BASIC13.39□□□□□ -0.27
UBE2AP49459 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBE2AP49459 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBE2AP49459 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBE2AP49459 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBE2AP49459 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBE2AP49459 MED17-221ENST00000639724 2317 ntTSL 5 BASIC13.39□□□□□ -0.27
UBE2AP49459 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBE2AP49459 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC13.39□□□□□ -0.27
UBE2AP49459 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
UBE2AP49459 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC13.39□□□□□ -0.27
UBE2AP49459 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC13.39□□□□□ -0.27
UBE2AP49459 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBE2AP49459 AC131281.2-201ENST00000520478 145 ntBASIC13.39□□□□□ -0.27
UBE2AP49459 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC13.39□□□□□ -0.27
UBE2AP49459 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBE2AP49459 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC13.39□□□□□ -0.27
UBE2AP49459 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC13.39□□□□□ -0.27
UBE2AP49459 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
UBE2AP49459 STX4-202ENST00000394998 1498 ntTSL 2 BASIC13.39□□□□□ -0.27
UBE2AP49459 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC13.39□□□□□ -0.27
UBE2AP49459 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBE2AP49459 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
UBE2AP49459 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBE2AP49459 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBE2AP49459 FBXW4P1-201ENST00000426721 2239 ntBASIC13.39□□□□□ -0.27
UBE2AP49459 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBE2AP49459 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC13.39□□□□□ -0.27
UBE2AP49459 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBE2AP49459 OR7E47P-201ENST00000546390 1422 ntBASIC13.39□□□□□ -0.27
UBE2AP49459 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC13.38□□□□□ -0.27
UBE2AP49459 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2AP49459 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2AP49459 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2AP49459 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2AP49459 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2AP49459 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2AP49459 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC13.38□□□□□ -0.27
UBE2AP49459 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2AP49459 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2AP49459 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
UBE2AP49459 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC13.38□□□□□ -0.27
UBE2AP49459 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2AP49459 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2AP49459 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2AP49459 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2AP49459 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2AP49459 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
UBE2AP49459 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2AP49459 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
UBE2AP49459 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2AP49459 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2AP49459 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
UBE2AP49459 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC13.37□□□□□ -0.27
UBE2AP49459 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms