Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.71■□□□□ 0.27
CDC34P49427 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.71■□□□□ 0.27
CDC34P49427 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.71■□□□□ 0.27
CDC34P49427 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.71■□□□□ 0.27
CDC34P49427 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDC34P49427 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.71■□□□□ 0.26
CDC34P49427 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CDC34P49427 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.7■□□□□ 0.26
CDC34P49427 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC34P49427 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDC34P49427 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CDC34P49427 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CDC34P49427 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC34P49427 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CDC34P49427 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC34P49427 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC34P49427 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.7■□□□□ 0.26
CDC34P49427 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.7■□□□□ 0.26
CDC34P49427 DUX4L18-201ENST00000553347 1267 ntBASIC16.7■□□□□ 0.26
CDC34P49427 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC34P49427 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.7■□□□□ 0.26
CDC34P49427 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDC34P49427 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC34P49427 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC34P49427 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC34P49427 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC34P49427 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC34P49427 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.69■□□□□ 0.26
CDC34P49427 AL049796.1-201ENST00000565336 1766 ntBASIC16.69■□□□□ 0.26
CDC34P49427 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CDC34P49427 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC34P49427 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CDC34P49427 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC34P49427 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC34P49427 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC34P49427 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.69■□□□□ 0.26
CDC34P49427 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.69■□□□□ 0.26
CDC34P49427 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.69■□□□□ 0.26
CDC34P49427 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDC34P49427 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
CDC34P49427 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC34P49427 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC34P49427 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDC34P49427 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC34P49427 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CDC34P49427 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC34P49427 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC34P49427 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDC34P49427 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC34P49427 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC34P49427 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDC34P49427 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.68■□□□□ 0.26
CDC34P49427 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.68■□□□□ 0.26
CDC34P49427 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.68■□□□□ 0.26
CDC34P49427 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC34P49427 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC34P49427 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC34P49427 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.68■□□□□ 0.26
CDC34P49427 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CDC34P49427 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.68■□□□□ 0.26
CDC34P49427 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDC34P49427 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC34P49427 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC34P49427 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC34P49427 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDC34P49427 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC34P49427 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC34P49427 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC34P49427 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.67■□□□□ 0.26
CDC34P49427 AC074183.2-201ENST00000623112 922 ntBASIC16.67■□□□□ 0.26
CDC34P49427 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CDC34P49427 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CDC34P49427 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.67■□□□□ 0.26
CDC34P49427 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CDC34P49427 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC34P49427 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC34P49427 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC34P49427 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.66■□□□□ 0.26
CDC34P49427 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC34P49427 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.66■□□□□ 0.26
CDC34P49427 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC34P49427 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.66■□□□□ 0.26
CDC34P49427 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.66■□□□□ 0.26
CDC34P49427 GABARAPL3-202ENST00000624044 1851 ntBASIC16.66■□□□□ 0.26
CDC34P49427 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.66■□□□□ 0.26
CDC34P49427 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CDC34P49427 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC34P49427 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC34P49427 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC34P49427 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC34P49427 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CDC34P49427 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
CDC34P49427 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CDC34P49427 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC34P49427 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC34P49427 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CDC34P49427 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.65■□□□□ 0.26
CDC34P49427 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.65■□□□□ 0.26
CDC34P49427 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.65■□□□□ 0.26
CDC34P49427 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms