Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 YIL047C-AYIL047C-A 369 nt1.91□□□□□ -2.1
VPS55P47111 JID1YPR061C 906 nt1.91□□□□□ -2.1
VPS55P47111 CWH41YGL027C 2502 nt1.91□□□□□ -2.1
VPS55P47111 NUP170YBL079W 4509 nt1.91□□□□□ -2.1
VPS55P47111 YDR061WYDR061W 1620 nt1.91□□□□□ -2.1
VPS55P47111 SPF1YEL031W 3648 nt1.91□□□□□ -2.1
VPS55P47111 PDC2YDR081C 2778 nt1.9□□□□□ -2.1
VPS55P47111 RPL1BYGL135W 654 nt1.9□□□□□ -2.11
VPS55P47111 YIL156W-BYIL156W-B 222 nt1.9□□□□□ -2.11
VPS55P47111 GLG2YJL137C 1143 nt1.9□□□□□ -2.11
VPS55P47111 RPL17BYJL177W 555 nt1.9□□□□□ -2.11
VPS55P47111 SIC1YLR079W 855 nt1.9□□□□□ -2.11
VPS55P47111 MIC27YNL100W 705 nt1.9□□□□□ -2.11
VPS55P47111 AAR2YBL074C 1068 nt1.9□□□□□ -2.11
VPS55P47111 RPL1AYPL220W 654 nt1.9□□□□□ -2.11
VPS55P47111 VTC3YPL019C 2508 nt1.9□□□□□ -2.11
VPS55P47111 SPP382YLR424W 2127 nt1.9□□□□□ -2.11
VPS55P47111 RPN5YDL147W 1338 nt1.9□□□□□ -2.11
VPS55P47111 SAK1YER129W 3429 nt1.89□□□□□ -2.11
VPS55P47111 PHO91YNR013C 2685 nt1.89□□□□□ -2.11
VPS55P47111 PHO81YGR233C 3537 nt1.89□□□□□ -2.11
VPS55P47111 TMN3YER113C 2121 nt1.89□□□□□ -2.11
VPS55P47111 MPS2YGL075C 1164 nt1.89□□□□□ -2.11
VPS55P47111 YHL006W-AYHL006W-A 354 nt1.89□□□□□ -2.11
VPS55P47111 PAU23YLR037C 375 nt1.89□□□□□ -2.11
VPS55P47111 PEX17YNL214W 600 nt1.89□□□□□ -2.11
VPS55P47111 YNR062CYNR062C 984 nt1.89□□□□□ -2.11
VPS55P47111 RAS1YOR101W 930 nt1.89□□□□□ -2.11
VPS55P47111 YPR027CYPR027C 834 nt1.89□□□□□ -2.11
VPS55P47111 SMC2YFR031C 3513 nt1.89□□□□□ -2.11
VPS55P47111 YPK3YBR028C 1578 nt1.89□□□□□ -2.11
VPS55P47111 SLN1YIL147C 3663 nt1.88□□□□□ -2.11
VPS55P47111 GAS2YLR343W 1668 nt1.88□□□□□ -2.11
VPS55P47111 YCR101CYCR101C 549 nt1.88□□□□□ -2.11
VPS55P47111 RPB9YGL070C 369 nt1.88□□□□□ -2.11
VPS55P47111 SPO74YGL170C 1242 nt1.88□□□□□ -2.11
VPS55P47111 PAU14YIL176C 363 nt1.88□□□□□ -2.11
VPS55P47111 ASG7YJL170C 630 nt1.88□□□□□ -2.11
VPS55P47111 PAU1YJL223C 363 nt1.88□□□□□ -2.11
VPS55P47111 YLR416CYLR416C 399 nt1.88□□□□□ -2.11
VPS55P47111 HHF2YNL030W 312 nt1.88□□□□□ -2.11
VPS55P47111 END3YNL084C 1050 nt1.88□□□□□ -2.11
VPS55P47111 EBS1YDR206W 2655 nt1.88□□□□□ -2.11
VPS55P47111 TCM62YBR044C 1719 nt1.88□□□□□ -2.11
VPS55P47111 TOM70YNL121C 1854 nt1.88□□□□□ -2.11
VPS55P47111 SCP160YJL080C 3669 nt1.87□□□□□ -2.11
VPS55P47111 PHO2YDL106C 1680 nt1.87□□□□□ -2.11
VPS55P47111 PRM2YIL037C 1971 nt1.87□□□□□ -2.11
VPS55P47111 SNX41YDR425W 1878 nt1.87□□□□□ -2.11
VPS55P47111 SPT2YER161C 1002 nt1.87□□□□□ -2.11
VPS55P47111 YGR015CYGR015C 987 nt1.87□□□□□ -2.11
VPS55P47111 YAL026C-AYAL026C-A 438 nt1.87□□□□□ -2.11
VPS55P47111 IME1YJR094C 1083 nt1.87□□□□□ -2.11
VPS55P47111 SAS2YMR127C 1017 nt1.87□□□□□ -2.11
VPS55P47111 RPL20AYMR242C 519 nt1.87□□□□□ -2.11
VPS55P47111 RLP7YNL002C 969 nt1.87□□□□□ -2.11
VPS55P47111 SCD5YOR329C 2619 nt1.87□□□□□ -2.11
VPS55P47111 DAD3YBR233W-A 285 nt1.87□□□□□ -2.11
VPS55P47111 YCR064CYCR064C 411 nt1.86□□□□□ -2.11
VPS55P47111 RPS29BYDL061C 171 nt1.86□□□□□ -2.11
VPS55P47111 PSY1YKL076C 384 nt1.86□□□□□ -2.11
VPS55P47111 ENV10YLR065C 546 nt1.86□□□□□ -2.11
VPS55P47111 MST28YAR033W 705 nt1.86□□□□□ -2.11
VPS55P47111 NDL1YLR254C 570 nt1.86□□□□□ -2.11
VPS55P47111 YNL143CYNL143C 393 nt1.86□□□□□ -2.11
VPS55P47111 YBL108WYBL108W 306 nt1.86□□□□□ -2.11
VPS55P47111 PHO88YBR106W 567 nt1.86□□□□□ -2.11
VPS55P47111 TPS2YDR074W 2691 nt1.86□□□□□ -2.11
VPS55P47111 YJL181WYJL181W 1836 nt1.86□□□□□ -2.11
VPS55P47111 MSB1YOR188W 3414 nt1.86□□□□□ -2.11
VPS55P47111 MET6YER091C 2304 nt1.85□□□□□ -2.11
VPS55P47111 STE11YLR362W 2154 nt1.85□□□□□ -2.11
VPS55P47111 COS7YDL248W 1152 nt1.85□□□□□ -2.11
VPS55P47111 SPO16YHR153C 597 nt1.85□□□□□ -2.11
VPS55P47111 COS5YJR161C 1152 nt1.85□□□□□ -2.11
VPS55P47111 YLR154W-EYLR154W-E 204 nt1.85□□□□□ -2.11
VPS55P47111 INO4YOL108C 456 nt1.85□□□□□ -2.11
VPS55P47111 CYC2YOR037W 1101 nt1.85□□□□□ -2.11
VPS55P47111 DSN1YIR010W 1731 nt1.85□□□□□ -2.11
VPS55P47111 CIK1YMR198W 1785 nt1.85□□□□□ -2.11
VPS55P47111 DBP5YOR046C 1449 nt1.84□□□□□ -2.11
VPS55P47111 YKU80YMR106C 1890 nt1.84□□□□□ -2.11
VPS55P47111 NFI1YOR156C 2181 nt1.84□□□□□ -2.11
VPS55P47111 AEP2YMR282C 1743 nt1.84□□□□□ -2.11
VPS55P47111 MSH2YOL090W 2895 nt1.84□□□□□ -2.11
VPS55P47111 ALG8YOR067C 1734 nt1.84□□□□□ -2.11
VPS55P47111 PTI1YGR156W 1278 nt1.84□□□□□ -2.11
VPS55P47111 YGR160WYGR160W 612 nt1.84□□□□□ -2.11
VPS55P47111 YLR462WYLR462W 609 nt1.84□□□□□ -2.11
VPS55P47111 MRPL33YMR286W 261 nt1.84□□□□□ -2.11
VPS55P47111 HHF1YBR009C 312 nt1.84□□□□□ -2.11
VPS55P47111 RPS11BYBR048W 471 nt1.84□□□□□ -2.11
VPS55P47111 ISA2YPR067W 558 nt1.84□□□□□ -2.11
VPS55P47111 OSW7YFR039C 1533 nt1.84□□□□□ -2.11
VPS55P47111 EXO84YBR102C 2262 nt1.84□□□□□ -2.12
VPS55P47111 APL5YPL195W 2799 nt1.84□□□□□ -2.12
VPS55P47111 SMY2YBR172C 2223 nt1.83□□□□□ -2.12
VPS55P47111 GEA1YJR031C 4227 nt1.83□□□□□ -2.12
VPS55P47111 TOF1YNL273W 3717 nt1.83□□□□□ -2.12
VPS55P47111 SIR3YLR442C 2937 nt1.83□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 56.5 ms