Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	YGR045C	YGR045C	363 nt		4.11	□□□□□ -1.75
CAF16	P43569	CIC1	YHR052W	1131 nt		4.11	□□□□□ -1.75
CAF16	P43569	YPL077C	YPL077C	723 nt		4.11	□□□□□ -1.75
CAF16	P43569	SSH4	YKL124W	1740 nt		4.11	□□□□□ -1.75
CAF16	P43569	EGT2	YNL327W	3126 nt		4.11	□□□□□ -1.75
CAF16	P43569	AZR1	YGR224W	1842 nt		4.11	□□□□□ -1.75
CAF16	P43569	PRM1	YNL279W	1986 nt		4.11	□□□□□ -1.75
CAF16	P43569	LAS1	YKR063C	1509 nt		4.11	□□□□□ -1.75
CAF16	P43569	ERG11	YHR007C	1593 nt		4.1	□□□□□ -1.75
CAF16	P43569	CYM1	YDR430C	2970 nt		4.1	□□□□□ -1.75
CAF16	P43569	LST4	YKL176C	2487 nt		4.1	□□□□□ -1.75
CAF16	P43569	NCB2	YDR397C	441 nt		4.1	□□□□□ -1.75
CAF16	P43569	NTF2	YER009W	378 nt		4.1	□□□□□ -1.75
CAF16	P43569	CNN1	YFR046C	1086 nt		4.1	□□□□□ -1.75
CAF16	P43569	YIL021C-A	YIL021C-A	270 nt		4.1	□□□□□ -1.75
CAF16	P43569	YNK1	YKL067W	462 nt		4.1	□□□□□ -1.75
CAF16	P43569	SWS2	YNL081C	432 nt		4.1	□□□□□ -1.75
CAF16	P43569	YBR201C-A	YBR201C-A	204 nt		4.1	□□□□□ -1.75
CAF16	P43569	DPB3	YBR278W	606 nt		4.1	□□□□□ -1.75
CAF16	P43569	TAF5	YBR198C	2397 nt		4.1	□□□□□ -1.75
CAF16	P43569	YMR102C	YMR102C	2505 nt		4.1	□□□□□ -1.75
CAF16	P43569	PHO8	YDR481C	1701 nt		4.09	□□□□□ -1.75
CAF16	P43569	MDM36	YPR083W	1740 nt		4.09	□□□□□ -1.75
CAF16	P43569	GPI1	YGR216C	1830 nt		4.09	□□□□□ -1.75
CAF16	P43569	NUP2	YLR335W	2163 nt		4.09	□□□□□ -1.75
CAF16	P43569	TGL2	YDR058C	981 nt		4.09	□□□□□ -1.75
CAF16	P43569	YDR199W	YDR199W	366 nt		4.09	□□□□□ -1.75
CAF16	P43569	YEL030C-A	YEL030C-A	315 nt		4.09	□□□□□ -1.75
CAF16	P43569	tK(CUU)C	tK(CUU)C	73 nt		4.09	□□□□□ -1.75
CAF16	P43569	tK(CUU)D1	tK(CUU)D1	73 nt		4.09	□□□□□ -1.75
CAF16	P43569	tK(CUU)D2	tK(CUU)D2	73 nt		4.09	□□□□□ -1.75
CAF16	P43569	tK(CUU)E1	tK(CUU)E1	73 nt		4.09	□□□□□ -1.75
CAF16	P43569	tK(CUU)E2	tK(CUU)E2	73 nt		4.09	□□□□□ -1.75
CAF16	P43569	tK(CUU)F	tK(CUU)F	73 nt		4.09	□□□□□ -1.75
CAF16	P43569	tK(CUU)G1	tK(CUU)G1	73 nt		4.09	□□□□□ -1.75
CAF16	P43569	tK(CUU)G2	tK(CUU)G2	73 nt		4.09	□□□□□ -1.75
CAF16	P43569	tK(CUU)G3	tK(CUU)G3	73 nt		4.09	□□□□□ -1.75
CAF16	P43569	tK(CUU)I	tK(CUU)I	73 nt		4.09	□□□□□ -1.75
CAF16	P43569	tK(CUU)J	tK(CUU)J	73 nt		4.09	□□□□□ -1.75
CAF16	P43569	tK(CUU)K	tK(CUU)K	73 nt		4.09	□□□□□ -1.75
CAF16	P43569	tK(CUU)M	tK(CUU)M	73 nt		4.09	□□□□□ -1.75
CAF16	P43569	tK(CUU)P	tK(CUU)P	73 nt		4.09	□□□□□ -1.75
CAF16	P43569	YJR111C	YJR111C	852 nt		4.09	□□□□□ -1.75
CAF16	P43569	YNL324W	YNL324W	396 nt		4.09	□□□□□ -1.75
CAF16	P43569	INO4	YOL108C	456 nt		4.09	□□□□□ -1.75
CAF16	P43569	GRE2	YOL151W	1029 nt		4.09	□□□□□ -1.75
CAF16	P43569	RET3	YPL010W	570 nt		4.09	□□□□□ -1.75
CAF16	P43569	PEP4	YPL154C	1218 nt		4.09	□□□□□ -1.75
CAF16	P43569	FRM2	YCL026C-A	582 nt		4.09	□□□□□ -1.75
CAF16	P43569	SUC2	YIL162W	1599 nt		4.09	□□□□□ -1.75
CAF16	P43569	RIA1	YNL163C	3333 nt		4.09	□□□□□ -1.76
CAF16	P43569	HO	YDL227C	1761 nt		4.09	□□□□□ -1.76
CAF16	P43569	HDA2	YDR295C	2025 nt		4.09	□□□□□ -1.76
CAF16	P43569	YER046W-A	YER046W-A	330 nt		4.08	□□□□□ -1.76
CAF16	P43569	TDA2	YER071C	381 nt		4.08	□□□□□ -1.76
CAF16	P43569	OTU1	YFL044C	906 nt		4.08	□□□□□ -1.76
CAF16	P43569	YGR228W	YGR228W	345 nt		4.08	□□□□□ -1.76
CAF16	P43569	THI11	YJR156C	1023 nt		4.08	□□□□□ -1.76
CAF16	P43569	YPT7	YML001W	627 nt		4.08	□□□□□ -1.76
CAF16	P43569	YBL028C	YBL028C	321 nt		4.08	□□□□□ -1.76
CAF16	P43569	MRPL44	YMR225C	297 nt		4.08	□□□□□ -1.76
CAF16	P43569	ATX2	YOR079C	942 nt		4.08	□□□□□ -1.76
CAF16	P43569	SEC66	YBR171W	621 nt		4.08	□□□□□ -1.76
CAF16	P43569	FRE4	YNR060W	2160 nt		4.07	□□□□□ -1.76
CAF16	P43569	VHR1	YIL056W	1923 nt		4.07	□□□□□ -1.76
CAF16	P43569	CHL1	YPL008W	2586 nt		4.07	□□□□□ -1.76
CAF16	P43569	MET32	YDR253C	576 nt		4.07	□□□□□ -1.76
CAF16	P43569	tR(ACG)Q2	tR(ACG)Q2	74 nt		4.07	□□□□□ -1.76
CAF16	P43569	YHR175W-A	YHR175W-A	150 nt		4.07	□□□□□ -1.76
CAF16	P43569	YKE2	YLR200W	345 nt		4.07	□□□□□ -1.76
CAF16	P43569	VPS63	YLR261C	327 nt		4.07	□□□□□ -1.76
CAF16	P43569	SAS2	YMR127C	1017 nt		4.07	□□□□□ -1.76
CAF16	P43569	ERG2	YMR202W	669 nt		4.07	□□□□□ -1.76
CAF16	P43569	RPL18B	YNL301C	561 nt		4.07	□□□□□ -1.76
CAF16	P43569	NHP6A	YPR052C	282 nt		4.07	□□□□□ -1.76
CAF16	P43569	APC5	YOR249C	2058 nt		4.07	□□□□□ -1.76
CAF16	P43569	YCR023C	YCR023C	1836 nt		4.07	□□□□□ -1.76
CAF16	P43569	IRC3	YDR332W	2070 nt		4.06	□□□□□ -1.76
CAF16	P43569	MET4	YNL103W	2019 nt		4.06	□□□□□ -1.76
CAF16	P43569	BCK2	YER167W	2556 nt		4.06	□□□□□ -1.76
CAF16	P43569	MIG3	YER028C	1185 nt		4.06	□□□□□ -1.76
CAF16	P43569	BRR6	YGL247W	594 nt		4.06	□□□□□ -1.76
CAF16	P43569	RPA12	YJR063W	378 nt		4.06	□□□□□ -1.76
CAF16	P43569	IDP2	YLR174W	1239 nt		4.06	□□□□□ -1.76
CAF16	P43569	YLR257W	YLR257W	966 nt		4.06	□□□□□ -1.76
CAF16	P43569	SRL1	YOR247W	633 nt		4.06	□□□□□ -1.76
CAF16	P43569	RPC40	YPR110C	1008 nt		4.06	□□□□□ -1.76
CAF16	P43569	YPK9	YOR291W	4419 nt		4.06	□□□□□ -1.76
CAF16	P43569	SEC2	YNL272C	2280 nt		4.06	□□□□□ -1.76
CAF16	P43569	RSC58	YLR033W	1509 nt		4.05	□□□□□ -1.76
CAF16	P43569	YOR192C-A	YOR192C-A	1317 nt		4.05	□□□□□ -1.76
CAF16	P43569	YOR343W-A	YOR343W-A	1317 nt		4.05	□□□□□ -1.76
CAF16	P43569	YER158C	YER158C	1722 nt		4.05	□□□□□ -1.76
CAF16	P43569	ADY2	YCR010C	852 nt		4.05	□□□□□ -1.76
CAF16	P43569	RIP1	YEL024W	648 nt		4.05	□□□□□ -1.76
CAF16	P43569	YER034W	YER034W	558 nt		4.05	□□□□□ -1.76
CAF16	P43569	YGR018C	YGR018C	330 nt		4.05	□□□□□ -1.76
CAF16	P43569	ASG7	YJL170C	630 nt		4.05	□□□□□ -1.76
CAF16	P43569	POM33	YLL023C	840 nt		4.05	□□□□□ -1.76
CAF16	P43569	YLR400W	YLR400W	474 nt		4.05	□□□□□ -1.76

Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms