Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSKP43235 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSKP43235 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSKP43235 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.09■□□□□ 0.97
CTSKP43235 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSKP43235 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.09■□□□□ 0.97
CTSKP43235 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSKP43235 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSKP43235 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.09■□□□□ 0.97
CTSKP43235 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSKP43235 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.09■□□□□ 0.97
CTSKP43235 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTSKP43235 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTSKP43235 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.08■□□□□ 0.97
CTSKP43235 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTSKP43235 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTSKP43235 AC069152.1-201ENST00000438030 544 ntBASIC21.08■□□□□ 0.97
CTSKP43235 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTSKP43235 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CTSKP43235 AC105036.2-201ENST00000569468 176 ntBASIC21.08■□□□□ 0.97
CTSKP43235 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.08■□□□□ 0.97
CTSKP43235 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.08■□□□□ 0.96
CTSKP43235 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CTSKP43235 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CTSKP43235 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTSKP43235 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTSKP43235 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.07■□□□□ 0.96
CTSKP43235 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CTSKP43235 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.07■□□□□ 0.96
CTSKP43235 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.07■□□□□ 0.96
CTSKP43235 OR7E47P-201ENST00000546390 1422 ntBASIC21.07■□□□□ 0.96
CTSKP43235 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTSKP43235 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTSKP43235 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CTSKP43235 AC073210.2-201ENST00000430369 194 ntBASIC21.07■□□□□ 0.96
CTSKP43235 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTSKP43235 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.07■□□□□ 0.96
CTSKP43235 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.07■□□□□ 0.96
CTSKP43235 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTSKP43235 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.07■□□□□ 0.96
CTSKP43235 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTSKP43235 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.07■□□□□ 0.96
CTSKP43235 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTSKP43235 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
CTSKP43235 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CTSKP43235 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTSKP43235 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTSKP43235 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTSKP43235 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CTSKP43235 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CTSKP43235 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTSKP43235 AC133041.1-202ENST00000642053 222 ntBASIC21.06■□□□□ 0.96
CTSKP43235 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CTSKP43235 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTSKP43235 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTSKP43235 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTSKP43235 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSKP43235 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSKP43235 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CTSKP43235 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTSKP43235 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSKP43235 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CTSKP43235 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSKP43235 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSKP43235 AL034346.1-201ENST00000568244 1277 ntBASIC21.05■□□□□ 0.96
CTSKP43235 SLC7A5P1-201ENST00000568957 537 ntBASIC21.05■□□□□ 0.96
CTSKP43235 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTSKP43235 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSKP43235 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.05■□□□□ 0.96
CTSKP43235 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.05■□□□□ 0.96
CTSKP43235 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTSKP43235 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CTSKP43235 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.05■□□□□ 0.96
CTSKP43235 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTSKP43235 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.04■□□□□ 0.96
CTSKP43235 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTSKP43235 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTSKP43235 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.04■□□□□ 0.96
CTSKP43235 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.04■□□□□ 0.96
CTSKP43235 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTSKP43235 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTSKP43235 EEF1DP3-203ENST00000566025 782 ntBASIC21.04■□□□□ 0.96
CTSKP43235 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.04■□□□□ 0.96
CTSKP43235 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CTSKP43235 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.04■□□□□ 0.96
CTSKP43235 AC013268.1-206ENST00000638368 961 ntBASIC21.04■□□□□ 0.96
CTSKP43235 AC112229.1-201ENST00000639295 961 ntBASIC21.04■□□□□ 0.96
CTSKP43235 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTSKP43235 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.04■□□□□ 0.96
CTSKP43235 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTSKP43235 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTSKP43235 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTSKP43235 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.04■□□□□ 0.96
CTSKP43235 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTSKP43235 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTSKP43235 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTSKP43235 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSKP43235 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CTSKP43235 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSKP43235 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms