Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC38.14■■■■□ 3.7
NCAPD3P42695 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC38.14■■■■□ 3.7
NCAPD3P42695 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
NCAPD3P42695 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC38.14■■■■□ 3.7
NCAPD3P42695 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
NCAPD3P42695 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC38.14■■■■□ 3.7
NCAPD3P42695 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
NCAPD3P42695 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC38.13■■■■□ 3.69
NCAPD3P42695 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC38.13■■■■□ 3.69
NCAPD3P42695 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC38.13■■■■□ 3.69
NCAPD3P42695 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC38.13■■■■□ 3.69
NCAPD3P42695 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC38.13■■■■□ 3.69
NCAPD3P42695 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC38.13■■■■□ 3.69
NCAPD3P42695 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC38.13■■■■□ 3.69
NCAPD3P42695 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
NCAPD3P42695 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC38.12■■■■□ 3.69
NCAPD3P42695 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
NCAPD3P42695 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC38.12■■■■□ 3.69
NCAPD3P42695 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC38.12■■■■□ 3.69
NCAPD3P42695 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC38.12■■■■□ 3.69
NCAPD3P42695 LSM12P1-201ENST00000411836 588 ntBASIC38.12■■■■□ 3.69
NCAPD3P42695 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC38.12■■■■□ 3.69
NCAPD3P42695 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC38.12■■■■□ 3.69
NCAPD3P42695 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC38.12■■■■□ 3.69
NCAPD3P42695 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC38.12■■■■□ 3.69
NCAPD3P42695 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC38.11■■■■□ 3.69
NCAPD3P42695 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
NCAPD3P42695 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC38.11■■■■□ 3.69
NCAPD3P42695 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC38.11■■■■□ 3.69
NCAPD3P42695 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
NCAPD3P42695 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
NCAPD3P42695 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC38.11■■■■□ 3.69
NCAPD3P42695 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
NCAPD3P42695 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC38.1■■■■□ 3.69
NCAPD3P42695 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC38.1■■■■□ 3.69
NCAPD3P42695 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC38.1■■■■□ 3.69
NCAPD3P42695 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC38.1■■■■□ 3.69
NCAPD3P42695 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
NCAPD3P42695 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
NCAPD3P42695 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC38.09■■■■□ 3.69
NCAPD3P42695 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC38.09■■■■□ 3.69
NCAPD3P42695 PNMA6B-201ENST00000538162 1200 ntBASIC38.09■■■■□ 3.69
NCAPD3P42695 AC069544.1-201ENST00000609399 999 ntBASIC38.09■■■■□ 3.69
NCAPD3P42695 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC38.09■■■■□ 3.69
NCAPD3P42695 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC38.09■■■■□ 3.69
NCAPD3P42695 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC38.09■■■■□ 3.69
NCAPD3P42695 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC38.09■■■■□ 3.69
NCAPD3P42695 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC38.09■■■■□ 3.69
NCAPD3P42695 AC012618.2-201ENST00000428058 849 ntBASIC38.09■■■■□ 3.69
NCAPD3P42695 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC38.09■■■■□ 3.69
NCAPD3P42695 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC38.09■■■■□ 3.69
NCAPD3P42695 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
NCAPD3P42695 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
NCAPD3P42695 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC38.08■■■■□ 3.69
NCAPD3P42695 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC38.08■■■■□ 3.69
NCAPD3P42695 LINC00526-201ENST00000581067 1875 ntBASIC38.08■■■■□ 3.69
NCAPD3P42695 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
NCAPD3P42695 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC38.08■■■■□ 3.69
NCAPD3P42695 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
NCAPD3P42695 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
NCAPD3P42695 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC38.08■■■■□ 3.69
NCAPD3P42695 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC38.08■■■■□ 3.69
NCAPD3P42695 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC38.07■■■■□ 3.69
NCAPD3P42695 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.69
NCAPD3P42695 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC38.07■■■■□ 3.69
NCAPD3P42695 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.69
NCAPD3P42695 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC38.07■■■■□ 3.69
NCAPD3P42695 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.68
NCAPD3P42695 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC38.07■■■■□ 3.68
NCAPD3P42695 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC38.07■■■■□ 3.68
NCAPD3P42695 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
NCAPD3P42695 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC38.06■■■■□ 3.68
NCAPD3P42695 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
NCAPD3P42695 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC38.06■■■■□ 3.68
NCAPD3P42695 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC38.06■■■■□ 3.68
NCAPD3P42695 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC38.06■■■■□ 3.68
NCAPD3P42695 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC38.05■■■■□ 3.68
NCAPD3P42695 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC38.05■■■■□ 3.68
NCAPD3P42695 OR7E47P-201ENST00000546390 1422 ntBASIC38.05■■■■□ 3.68
NCAPD3P42695 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC38.05■■■■□ 3.68
NCAPD3P42695 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC38.05■■■■□ 3.68
NCAPD3P42695 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC38.05■■■■□ 3.68
NCAPD3P42695 KRT18P21-201ENST00000515767 1272 ntBASIC38.05■■■■□ 3.68
NCAPD3P42695 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC38.05■■■■□ 3.68
NCAPD3P42695 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC38.05■■■■□ 3.68
NCAPD3P42695 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
NCAPD3P42695 LINC01960-201ENST00000563759 1884 ntBASIC38.05■■■■□ 3.68
NCAPD3P42695 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
NCAPD3P42695 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC38.05■■■■□ 3.68
NCAPD3P42695 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC38.05■■■■□ 3.68
NCAPD3P42695 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
NCAPD3P42695 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC38.04■■■■□ 3.68
NCAPD3P42695 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC38.04■■■■□ 3.68
NCAPD3P42695 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC38.04■■■■□ 3.68
NCAPD3P42695 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC38.04■■■■□ 3.68
NCAPD3P42695 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
NCAPD3P42695 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC38.03■■■■□ 3.68
NCAPD3P42695 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC38.03■■■■□ 3.68
NCAPD3P42695 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC38.03■■■■□ 3.68
NCAPD3P42695 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC38.03■■■■□ 3.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms