Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AC007375.3-201ENST00000600936 2314 ntBASIC18.73■□□□□ 0.59
MSR1P21757 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.73■□□□□ 0.59
MSR1P21757 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSR1P21757 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.72■□□□□ 0.59
MSR1P21757 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSR1P21757 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSR1P21757 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSR1P21757 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.72■□□□□ 0.59
MSR1P21757 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSR1P21757 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSR1P21757 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSR1P21757 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSR1P21757 MIR638-201ENST00000385237 100 ntBASIC18.72■□□□□ 0.59
MSR1P21757 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.72■□□□□ 0.59
MSR1P21757 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSR1P21757 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.72■□□□□ 0.59
MSR1P21757 AL354811.1-201ENST00000610286 706 ntBASIC18.72■□□□□ 0.59
MSR1P21757 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.72■□□□□ 0.59
MSR1P21757 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
MSR1P21757 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.72■□□□□ 0.59
MSR1P21757 Z98882.1-201ENST00000622160 2253 ntBASIC18.72■□□□□ 0.59
MSR1P21757 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSR1P21757 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
MSR1P21757 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSR1P21757 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
MSR1P21757 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSR1P21757 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSR1P21757 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.72■□□□□ 0.59
MSR1P21757 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.71■□□□□ 0.59
MSR1P21757 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.71■□□□□ 0.59
MSR1P21757 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.71■□□□□ 0.59
MSR1P21757 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.71■□□□□ 0.59
MSR1P21757 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MSR1P21757 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.71■□□□□ 0.59
MSR1P21757 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MSR1P21757 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MSR1P21757 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
MSR1P21757 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MSR1P21757 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.71■□□□□ 0.59
MSR1P21757 AC012414.1-201ENST00000556676 535 ntBASIC18.71■□□□□ 0.59
MSR1P21757 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MSR1P21757 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
MSR1P21757 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
MSR1P21757 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MSR1P21757 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSR1P21757 AC005224.4-201ENST00000583262 1652 ntBASIC18.7■□□□□ 0.58
MSR1P21757 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.7■□□□□ 0.58
MSR1P21757 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MSR1P21757 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSR1P21757 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.7■□□□□ 0.58
MSR1P21757 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MSR1P21757 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.7■□□□□ 0.58
MSR1P21757 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MSR1P21757 AC105265.2-201ENST00000467189 838 ntBASIC18.7■□□□□ 0.58
MSR1P21757 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MSR1P21757 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
MSR1P21757 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSR1P21757 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MSR1P21757 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSR1P21757 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.7■□□□□ 0.58
MSR1P21757 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.69■□□□□ 0.58
MSR1P21757 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSR1P21757 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSR1P21757 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.69■□□□□ 0.58
MSR1P21757 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSR1P21757 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSR1P21757 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.69■□□□□ 0.58
MSR1P21757 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
MSR1P21757 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.69■□□□□ 0.58
MSR1P21757 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.69■□□□□ 0.58
MSR1P21757 AL358852.1-201ENST00000623174 1268 ntBASIC18.69■□□□□ 0.58
MSR1P21757 AC026310.3-201ENST00000625186 2373 ntBASIC18.69■□□□□ 0.58
MSR1P21757 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.69■□□□□ 0.58
MSR1P21757 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSR1P21757 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSR1P21757 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.69■□□□□ 0.58
MSR1P21757 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MSR1P21757 AC055733.4-201ENST00000638462 1354 ntBASIC18.68■□□□□ 0.58
MSR1P21757 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSR1P21757 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
MSR1P21757 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSR1P21757 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.68■□□□□ 0.58
MSR1P21757 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.68■□□□□ 0.58
MSR1P21757 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MSR1P21757 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.68■□□□□ 0.58
MSR1P21757 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.68■□□□□ 0.58
MSR1P21757 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.68■□□□□ 0.58
MSR1P21757 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.68■□□□□ 0.58
MSR1P21757 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MSR1P21757 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
MSR1P21757 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSR1P21757 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.68■□□□□ 0.58
MSR1P21757 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MSR1P21757 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.67■□□□□ 0.58
MSR1P21757 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.67■□□□□ 0.58
MSR1P21757 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MSR1P21757 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.67■□□□□ 0.58
MSR1P21757 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSR1P21757 IRS3P-201ENST00000223076 1006 ntBASIC18.67■□□□□ 0.58
MSR1P21757 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms