Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL11A2P13942 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC26.34■■□□□ 1.81
COL11A2P13942 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC26.34■■□□□ 1.81
COL11A2P13942 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
COL11A2P13942 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.34■■□□□ 1.81
COL11A2P13942 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC26.34■■□□□ 1.81
COL11A2P13942 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
COL11A2P13942 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
COL11A2P13942 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL11A2P13942 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL11A2P13942 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL11A2P13942 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL11A2P13942 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC26.33■■□□□ 1.81
COL11A2P13942 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC26.33■■□□□ 1.81
COL11A2P13942 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC26.33■■□□□ 1.81
COL11A2P13942 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC26.33■■□□□ 1.81
COL11A2P13942 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL11A2P13942 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC26.33■■□□□ 1.81
COL11A2P13942 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.8
COL11A2P13942 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL11A2P13942 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL11A2P13942 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL11A2P13942 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC26.32■■□□□ 1.8
COL11A2P13942 RNF146-206ENST00000480444 843 ntTSL 2 BASIC26.32■■□□□ 1.8
COL11A2P13942 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC26.32■■□□□ 1.8
COL11A2P13942 AC008175.2-201ENST00000612840 297 ntBASIC26.32■■□□□ 1.8
COL11A2P13942 KRT17P1-201ENST00000399211 1546 ntBASIC26.32■■□□□ 1.8
COL11A2P13942 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
COL11A2P13942 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
COL11A2P13942 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
COL11A2P13942 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL11A2P13942 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL11A2P13942 CD44-222ENST00000526025 1052 ntTSL 2 BASIC26.31■■□□□ 1.8
COL11A2P13942 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
COL11A2P13942 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL11A2P13942 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.31■■□□□ 1.8
COL11A2P13942 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC26.31■■□□□ 1.8
COL11A2P13942 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
COL11A2P13942 AC243732.1-201ENST00000612648 864 ntBASIC26.31■■□□□ 1.8
COL11A2P13942 AL359736.2-201ENST00000621992 437 ntBASIC26.31■■□□□ 1.8
COL11A2P13942 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC26.31■■□□□ 1.8
COL11A2P13942 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC26.3■■□□□ 1.8
COL11A2P13942 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC26.3■■□□□ 1.8
COL11A2P13942 RPS2P4-201ENST00000476944 856 ntBASIC26.3■■□□□ 1.8
COL11A2P13942 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
COL11A2P13942 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL11A2P13942 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC26.3■■□□□ 1.8
COL11A2P13942 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
COL11A2P13942 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL11A2P13942 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL11A2P13942 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL11A2P13942 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
COL11A2P13942 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL11A2P13942 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
COL11A2P13942 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL11A2P13942 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL11A2P13942 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL11A2P13942 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL11A2P13942 AC008550.1-201ENST00000511500 884 ntBASIC26.28■■□□□ 1.8
COL11A2P13942 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL11A2P13942 AC120498.10-201ENST00000621827 505 ntBASIC26.28■■□□□ 1.8
COL11A2P13942 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL11A2P13942 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL11A2P13942 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL11A2P13942 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL11A2P13942 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
COL11A2P13942 POU5F1P4-201ENST00000413175 1085 ntBASIC26.28■■□□□ 1.8
COL11A2P13942 AC060766.5-201ENST00000590539 871 ntBASIC26.28■■□□□ 1.8
COL11A2P13942 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL11A2P13942 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL11A2P13942 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL11A2P13942 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
COL11A2P13942 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL11A2P13942 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.27■■□□□ 1.8
COL11A2P13942 BAALC-201ENST00000297574 801 ntTSL 3 BASIC26.27■■□□□ 1.8
COL11A2P13942 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26.27■■□□□ 1.8
COL11A2P13942 AL355472.2-201ENST00000422958 438 ntBASIC26.27■■□□□ 1.8
COL11A2P13942 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC26.27■■□□□ 1.8
COL11A2P13942 GATS-209ENST00000454084 1030 ntTSL 3 BASIC26.27■■□□□ 1.8
COL11A2P13942 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC26.27■■□□□ 1.8
COL11A2P13942 AC061975.6-201ENST00000579045 1553 ntBASIC26.27■■□□□ 1.8
COL11A2P13942 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL11A2P13942 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.26■■□□□ 1.8
COL11A2P13942 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL11A2P13942 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL11A2P13942 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL11A2P13942 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL11A2P13942 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.26■■□□□ 1.79
COL11A2P13942 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC26.25■■□□□ 1.79
COL11A2P13942 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COL11A2P13942 PEX7-202ENST00000367756 680 ntTSL 3 BASIC26.25■■□□□ 1.79
COL11A2P13942 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL11A2P13942 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC26.25■■□□□ 1.79
COL11A2P13942 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COL11A2P13942 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.25■■□□□ 1.79
COL11A2P13942 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
COL11A2P13942 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL11A2P13942 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC26.25■■□□□ 1.79
COL11A2P13942 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC26.25■■□□□ 1.79
COL11A2P13942 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms