Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AC087239.1-201ENST00000622671 572 ntBASIC17.16■□□□□ 0.34
DEFA4P12838 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.16■□□□□ 0.34
DEFA4P12838 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DEFA4P12838 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DEFA4P12838 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.16■□□□□ 0.34
DEFA4P12838 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
DEFA4P12838 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DEFA4P12838 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
DEFA4P12838 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.15■□□□□ 0.34
DEFA4P12838 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DEFA4P12838 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DEFA4P12838 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
DEFA4P12838 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DEFA4P12838 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DEFA4P12838 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DEFA4P12838 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DEFA4P12838 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.15■□□□□ 0.34
DEFA4P12838 CA15P2-201ENST00000611168 834 ntBASIC17.15■□□□□ 0.34
DEFA4P12838 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.15■□□□□ 0.34
DEFA4P12838 AC068587.7-201ENST00000641602 218 ntBASIC17.15■□□□□ 0.34
DEFA4P12838 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DEFA4P12838 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
DEFA4P12838 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DEFA4P12838 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DEFA4P12838 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
DEFA4P12838 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
DEFA4P12838 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
DEFA4P12838 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
DEFA4P12838 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.14■□□□□ 0.33
DEFA4P12838 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DEFA4P12838 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
DEFA4P12838 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DEFA4P12838 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
DEFA4P12838 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.14■□□□□ 0.33
DEFA4P12838 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DEFA4P12838 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.14■□□□□ 0.33
DEFA4P12838 MIR4466-201ENST00000606121 54 ntBASIC17.14■□□□□ 0.33
DEFA4P12838 AC131212.1-201ENST00000613771 668 ntBASIC17.14■□□□□ 0.33
DEFA4P12838 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.14■□□□□ 0.33
DEFA4P12838 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
DEFA4P12838 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.14■□□□□ 0.33
DEFA4P12838 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DEFA4P12838 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
DEFA4P12838 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DEFA4P12838 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DEFA4P12838 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DEFA4P12838 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DEFA4P12838 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DEFA4P12838 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.14■□□□□ 0.33
DEFA4P12838 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DEFA4P12838 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DEFA4P12838 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DEFA4P12838 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
DEFA4P12838 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
DEFA4P12838 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DEFA4P12838 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
DEFA4P12838 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.13■□□□□ 0.33
DEFA4P12838 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DEFA4P12838 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
DEFA4P12838 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DEFA4P12838 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DEFA4P12838 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.13■□□□□ 0.33
DEFA4P12838 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.13■□□□□ 0.33
DEFA4P12838 AC131281.2-201ENST00000520478 145 ntBASIC17.13■□□□□ 0.33
DEFA4P12838 AL138724.1-201ENST00000606771 1088 ntBASIC17.13■□□□□ 0.33
DEFA4P12838 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
DEFA4P12838 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DEFA4P12838 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DEFA4P12838 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DEFA4P12838 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DEFA4P12838 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.13■□□□□ 0.33
DEFA4P12838 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.12■□□□□ 0.33
DEFA4P12838 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.12■□□□□ 0.33
DEFA4P12838 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA4P12838 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.12■□□□□ 0.33
DEFA4P12838 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA4P12838 AL136116.3-201ENST00000402907 1138 ntBASIC17.12■□□□□ 0.33
DEFA4P12838 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA4P12838 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.12■□□□□ 0.33
DEFA4P12838 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.12■□□□□ 0.33
DEFA4P12838 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
DEFA4P12838 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA4P12838 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA4P12838 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA4P12838 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA4P12838 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA4P12838 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA4P12838 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA4P12838 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA4P12838 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA4P12838 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.11■□□□□ 0.33
DEFA4P12838 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.11■□□□□ 0.33
DEFA4P12838 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA4P12838 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA4P12838 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA4P12838 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.11■□□□□ 0.33
DEFA4P12838 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA4P12838 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA4P12838 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.11■□□□□ 0.33
DEFA4P12838 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms