Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.41■□□□□ 0.86
LINGO3P0C6S8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.41■□□□□ 0.86
LINGO3P0C6S8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.41■□□□□ 0.86
LINGO3P0C6S8 AL512631.2-201ENST00000604634 923 ntBASIC20.41■□□□□ 0.86
LINGO3P0C6S8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LINGO3P0C6S8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINGO3P0C6S8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINGO3P0C6S8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINGO3P0C6S8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.41■□□□□ 0.86
LINGO3P0C6S8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LINGO3P0C6S8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LINGO3P0C6S8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.41■□□□□ 0.86
LINGO3P0C6S8 AFG3L1P-217ENST00000557444 2447 ntBASIC20.41■□□□□ 0.86
LINGO3P0C6S8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
LINGO3P0C6S8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINGO3P0C6S8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LINGO3P0C6S8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINGO3P0C6S8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINGO3P0C6S8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINGO3P0C6S8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINGO3P0C6S8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.4■□□□□ 0.86
LINGO3P0C6S8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.4■□□□□ 0.86
LINGO3P0C6S8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.4■□□□□ 0.86
LINGO3P0C6S8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.4■□□□□ 0.86
LINGO3P0C6S8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.4■□□□□ 0.86
LINGO3P0C6S8 FP325331.1-202ENST00000623531 1380 ntBASIC20.4■□□□□ 0.86
LINGO3P0C6S8 C17orf82-201ENST00000623772 1530 ntBASIC20.4■□□□□ 0.86
LINGO3P0C6S8 LINC01529-204ENST00000636474 1715 ntBASIC20.4■□□□□ 0.86
LINGO3P0C6S8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
LINGO3P0C6S8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINGO3P0C6S8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINGO3P0C6S8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINGO3P0C6S8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LINGO3P0C6S8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.39■□□□□ 0.86
LINGO3P0C6S8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
LINGO3P0C6S8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
LINGO3P0C6S8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
LINGO3P0C6S8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LINGO3P0C6S8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LINGO3P0C6S8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LINGO3P0C6S8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LINGO3P0C6S8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.39■□□□□ 0.85
LINGO3P0C6S8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LINGO3P0C6S8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LINGO3P0C6S8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.39■□□□□ 0.85
LINGO3P0C6S8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
LINGO3P0C6S8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LINGO3P0C6S8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LINGO3P0C6S8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.39■□□□□ 0.85
LINGO3P0C6S8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LINGO3P0C6S8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LINGO3P0C6S8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
LINGO3P0C6S8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINGO3P0C6S8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LINGO3P0C6S8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
LINGO3P0C6S8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINGO3P0C6S8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINGO3P0C6S8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.38■□□□□ 0.85
LINGO3P0C6S8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.38■□□□□ 0.85
LINGO3P0C6S8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.38■□□□□ 0.85
LINGO3P0C6S8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LINGO3P0C6S8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LINGO3P0C6S8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINGO3P0C6S8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINGO3P0C6S8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.38■□□□□ 0.85
LINGO3P0C6S8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.38■□□□□ 0.85
LINGO3P0C6S8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINGO3P0C6S8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LINGO3P0C6S8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINGO3P0C6S8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.37■□□□□ 0.85
LINGO3P0C6S8 AC244015.2-201ENST00000616358 1861 ntBASIC20.37■□□□□ 0.85
LINGO3P0C6S8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.37■□□□□ 0.85
LINGO3P0C6S8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
LINGO3P0C6S8 AC131281.2-201ENST00000520478 145 ntBASIC20.37■□□□□ 0.85
LINGO3P0C6S8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
LINGO3P0C6S8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINGO3P0C6S8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINGO3P0C6S8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.37■□□□□ 0.85
LINGO3P0C6S8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINGO3P0C6S8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINGO3P0C6S8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LINGO3P0C6S8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LINGO3P0C6S8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.36■□□□□ 0.85
LINGO3P0C6S8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.36■□□□□ 0.85
LINGO3P0C6S8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINGO3P0C6S8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINGO3P0C6S8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LINGO3P0C6S8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LINGO3P0C6S8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINGO3P0C6S8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LINGO3P0C6S8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.36■□□□□ 0.85
LINGO3P0C6S8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.36■□□□□ 0.85
LINGO3P0C6S8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.36■□□□□ 0.85
LINGO3P0C6S8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LINGO3P0C6S8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.36■□□□□ 0.85
LINGO3P0C6S8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
LINGO3P0C6S8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINGO3P0C6S8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
LINGO3P0C6S8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINGO3P0C6S8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms