Protein–RNA interactions for Protein: P08865

RPSA, 40S ribosomal protein SA, humanhuman

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP08865 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPSAP08865 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RPSAP08865 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
RPSAP08865 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.4■□□□□ 0.86
RPSAP08865 GABARAPL3-202ENST00000624044 1851 ntBASIC20.4■□□□□ 0.86
RPSAP08865 BX323043.1-201ENST00000641006 1765 ntBASIC20.4■□□□□ 0.86
RPSAP08865 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPSAP08865 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RPSAP08865 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.4■□□□□ 0.86
RPSAP08865 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPSAP08865 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RPSAP08865 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.39■□□□□ 0.86
RPSAP08865 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RPSAP08865 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
RPSAP08865 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPSAP08865 AC004408.2-201ENST00000623613 2777 ntBASIC20.39■□□□□ 0.85
RPSAP08865 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
RPSAP08865 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPSAP08865 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RPSAP08865 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.39■□□□□ 0.85
RPSAP08865 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPSAP08865 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPSAP08865 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.39■□□□□ 0.85
RPSAP08865 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPSAP08865 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
RPSAP08865 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPSAP08865 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPSAP08865 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RPSAP08865 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RPSAP08865 MIR639-201ENST00000384974 98 ntBASIC20.38■□□□□ 0.85
RPSAP08865 AC093536.1-201ENST00000569153 554 ntBASIC20.38■□□□□ 0.85
RPSAP08865 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPSAP08865 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPSAP08865 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPSAP08865 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPSAP08865 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPSAP08865 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPSAP08865 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.38■□□□□ 0.85
RPSAP08865 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPSAP08865 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPSAP08865 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RPSAP08865 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RPSAP08865 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPSAP08865 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPSAP08865 AC144652.1-201ENST00000609974 1624 ntBASIC20.37■□□□□ 0.85
RPSAP08865 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RPSAP08865 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RPSAP08865 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.36■□□□□ 0.85
RPSAP08865 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPSAP08865 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPSAP08865 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPSAP08865 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPSAP08865 AC022413.1-201ENST00000624602 984 ntBASIC20.36■□□□□ 0.85
RPSAP08865 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPSAP08865 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPSAP08865 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RPSAP08865 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPSAP08865 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.36■□□□□ 0.85
RPSAP08865 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPSAP08865 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
RPSAP08865 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPSAP08865 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPSAP08865 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPSAP08865 AC007029.1-201ENST00000604183 313 ntBASIC20.35■□□□□ 0.85
RPSAP08865 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.35■□□□□ 0.85
RPSAP08865 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPSAP08865 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RPSAP08865 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPSAP08865 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
RPSAP08865 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RPSAP08865 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPSAP08865 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
RPSAP08865 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RPSAP08865 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPSAP08865 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPSAP08865 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPSAP08865 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPSAP08865 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPSAP08865 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPSAP08865 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.34■□□□□ 0.85
RPSAP08865 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPSAP08865 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.34■□□□□ 0.85
RPSAP08865 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPSAP08865 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RPSAP08865 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.33■□□□□ 0.85
RPSAP08865 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RPSAP08865 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RPSAP08865 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RPSAP08865 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPSAP08865 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPSAP08865 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.33■□□□□ 0.84
RPSAP08865 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPSAP08865 AP005212.1-201ENST00000581547 1997 ntBASIC20.33■□□□□ 0.84
RPSAP08865 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RPSAP08865 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPSAP08865 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.33■□□□□ 0.84
RPSAP08865 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.33■□□□□ 0.84
RPSAP08865 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPSAP08865 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPSAP08865 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms