Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.85■□□□□ 0.61
APOA1P02647 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.85■□□□□ 0.61
APOA1P02647 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.85■□□□□ 0.61
APOA1P02647 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
APOA1P02647 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APOA1P02647 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
APOA1P02647 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.85■□□□□ 0.61
APOA1P02647 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.85■□□□□ 0.61
APOA1P02647 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APOA1P02647 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APOA1P02647 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.84■□□□□ 0.61
APOA1P02647 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.84■□□□□ 0.61
APOA1P02647 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.84■□□□□ 0.61
APOA1P02647 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOA1P02647 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOA1P02647 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOA1P02647 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOA1P02647 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
APOA1P02647 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOA1P02647 MIR639-201ENST00000384974 98 ntBASIC18.84■□□□□ 0.61
APOA1P02647 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.84■□□□□ 0.61
APOA1P02647 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOA1P02647 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
APOA1P02647 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOA1P02647 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOA1P02647 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOA1P02647 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOA1P02647 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOA1P02647 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
APOA1P02647 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
APOA1P02647 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
APOA1P02647 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
APOA1P02647 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.83■□□□□ 0.61
APOA1P02647 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
APOA1P02647 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
APOA1P02647 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
APOA1P02647 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
APOA1P02647 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
APOA1P02647 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
APOA1P02647 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
APOA1P02647 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
APOA1P02647 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
APOA1P02647 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
APOA1P02647 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOA1P02647 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.82■□□□□ 0.6
APOA1P02647 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.82■□□□□ 0.6
APOA1P02647 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APOA1P02647 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOA1P02647 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOA1P02647 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOA1P02647 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
APOA1P02647 AL592293.1-201ENST00000502889 1188 ntBASIC18.82■□□□□ 0.6
APOA1P02647 AC022616.5-201ENST00000518796 181 ntBASIC18.82■□□□□ 0.6
APOA1P02647 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
APOA1P02647 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOA1P02647 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
APOA1P02647 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APOA1P02647 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOA1P02647 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOA1P02647 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
APOA1P02647 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.82■□□□□ 0.6
APOA1P02647 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOA1P02647 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.82■□□□□ 0.6
APOA1P02647 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
APOA1P02647 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APOA1P02647 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APOA1P02647 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
APOA1P02647 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APOA1P02647 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOA1P02647 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOA1P02647 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APOA1P02647 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
APOA1P02647 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APOA1P02647 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.81■□□□□ 0.6
APOA1P02647 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.81■□□□□ 0.6
APOA1P02647 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOA1P02647 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.81■□□□□ 0.6
APOA1P02647 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.81■□□□□ 0.6
APOA1P02647 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
APOA1P02647 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
APOA1P02647 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOA1P02647 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APOA1P02647 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
APOA1P02647 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APOA1P02647 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOA1P02647 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
APOA1P02647 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOA1P02647 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOA1P02647 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOA1P02647 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOA1P02647 GPX1-201ENST00000419349 1106 ntBASIC18.8■□□□□ 0.6
APOA1P02647 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOA1P02647 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOA1P02647 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
APOA1P02647 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOA1P02647 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOA1P02647 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOA1P02647 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.79■□□□□ 0.6
APOA1P02647 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APOA1P02647 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms