Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ALDH1A1P00352 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ALDH1A1P00352 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.53■■□□□ 1.52
ALDH1A1P00352 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ALDH1A1P00352 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.52■■□□□ 1.52
ALDH1A1P00352 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.52■■□□□ 1.52
ALDH1A1P00352 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ALDH1A1P00352 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC24.52■■□□□ 1.52
ALDH1A1P00352 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
ALDH1A1P00352 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ALDH1A1P00352 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
ALDH1A1P00352 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC24.52■■□□□ 1.52
ALDH1A1P00352 SNORA78-201ENST00000459373 127 ntBASIC24.52■■□□□ 1.52
ALDH1A1P00352 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
ALDH1A1P00352 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC24.52■■□□□ 1.52
ALDH1A1P00352 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC24.52■■□□□ 1.52
ALDH1A1P00352 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
ALDH1A1P00352 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
ALDH1A1P00352 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC24.52■■□□□ 1.52
ALDH1A1P00352 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ALDH1A1P00352 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
ALDH1A1P00352 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
ALDH1A1P00352 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.51■■□□□ 1.51
ALDH1A1P00352 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC24.51■■□□□ 1.51
ALDH1A1P00352 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
ALDH1A1P00352 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
ALDH1A1P00352 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ALDH1A1P00352 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ALDH1A1P00352 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC24.51■■□□□ 1.51
ALDH1A1P00352 RNF146-206ENST00000480444 843 ntTSL 2 BASIC24.51■■□□□ 1.51
ALDH1A1P00352 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
ALDH1A1P00352 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC24.51■■□□□ 1.51
ALDH1A1P00352 RPS20-210ENST00000523936 899 ntTSL 2 BASIC24.51■■□□□ 1.51
ALDH1A1P00352 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC24.51■■□□□ 1.51
ALDH1A1P00352 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC24.51■■□□□ 1.51
ALDH1A1P00352 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC24.51■■□□□ 1.51
ALDH1A1P00352 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ALDH1A1P00352 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
ALDH1A1P00352 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.5■■□□□ 1.51
ALDH1A1P00352 RN7SL471P-201ENST00000580476 299 ntBASIC24.5■■□□□ 1.51
ALDH1A1P00352 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
ALDH1A1P00352 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ALDH1A1P00352 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC24.5■■□□□ 1.51
ALDH1A1P00352 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
ALDH1A1P00352 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ALDH1A1P00352 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ALDH1A1P00352 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC24.49■■□□□ 1.51
ALDH1A1P00352 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ALDH1A1P00352 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.49■■□□□ 1.51
ALDH1A1P00352 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC24.49■■□□□ 1.51
ALDH1A1P00352 SPIB-206ENST00000596074 847 ntTSL 2 BASIC24.49■■□□□ 1.51
ALDH1A1P00352 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC24.49■■□□□ 1.51
ALDH1A1P00352 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
ALDH1A1P00352 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ALDH1A1P00352 LINC01960-201ENST00000563759 1884 ntBASIC24.49■■□□□ 1.51
ALDH1A1P00352 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ALDH1A1P00352 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.49■■□□□ 1.51
ALDH1A1P00352 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC24.48■■□□□ 1.51
ALDH1A1P00352 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC24.48■■□□□ 1.51
ALDH1A1P00352 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
ALDH1A1P00352 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
ALDH1A1P00352 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
ALDH1A1P00352 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
ALDH1A1P00352 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
ALDH1A1P00352 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ALDH1A1P00352 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
ALDH1A1P00352 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ALDH1A1P00352 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ALDH1A1P00352 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC24.47■■□□□ 1.51
ALDH1A1P00352 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ALDH1A1P00352 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
ALDH1A1P00352 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
ALDH1A1P00352 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ALDH1A1P00352 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ALDH1A1P00352 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ALDH1A1P00352 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
ALDH1A1P00352 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
ALDH1A1P00352 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
ALDH1A1P00352 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ALDH1A1P00352 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
ALDH1A1P00352 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ALDH1A1P00352 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ALDH1A1P00352 MAX-217ENST00000557277 728 ntTSL 3 BASIC24.46■■□□□ 1.51
ALDH1A1P00352 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC24.46■■□□□ 1.51
ALDH1A1P00352 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ALDH1A1P00352 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ALDH1A1P00352 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ALDH1A1P00352 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
ALDH1A1P00352 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
ALDH1A1P00352 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC24.45■■□□□ 1.5
ALDH1A1P00352 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
ALDH1A1P00352 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
ALDH1A1P00352 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC24.45■■□□□ 1.5
ALDH1A1P00352 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
ALDH1A1P00352 AC100791.3-201ENST00000617619 330 ntBASIC24.45■■□□□ 1.5
ALDH1A1P00352 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC24.45■■□□□ 1.5
ALDH1A1P00352 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ALDH1A1P00352 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.45■■□□□ 1.5
ALDH1A1P00352 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
ALDH1A1P00352 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms