Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.18■□□□□ 0.66
CLPXO76031 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPXO76031 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
CLPXO76031 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CLPXO76031 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPXO76031 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.18■□□□□ 0.66
CLPXO76031 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPXO76031 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.18■□□□□ 0.66
CLPXO76031 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CLPXO76031 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.18■□□□□ 0.66
CLPXO76031 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPXO76031 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CLPXO76031 PCDHAC2-203ENST00000615316 3011 ntBASIC19.18■□□□□ 0.66
CLPXO76031 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CLPXO76031 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPXO76031 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPXO76031 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLPXO76031 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLPXO76031 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CLPXO76031 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CLPXO76031 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLPXO76031 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLPXO76031 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.17■□□□□ 0.66
CLPXO76031 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLPXO76031 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLPXO76031 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLPXO76031 GUSBP5-201ENST00000418136 578 ntBASIC19.17■□□□□ 0.66
CLPXO76031 THA1P-201ENST00000590384 1145 ntBASIC19.17■□□□□ 0.66
CLPXO76031 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CLPXO76031 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
CLPXO76031 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLPXO76031 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLPXO76031 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLPXO76031 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLPXO76031 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.17■□□□□ 0.66
CLPXO76031 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CLPXO76031 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLPXO76031 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLPXO76031 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLPXO76031 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.16■□□□□ 0.66
CLPXO76031 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLPXO76031 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLPXO76031 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLPXO76031 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLPXO76031 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLPXO76031 AP005212.1-201ENST00000581547 1997 ntBASIC19.16■□□□□ 0.66
CLPXO76031 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLPXO76031 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLPXO76031 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.16■□□□□ 0.66
CLPXO76031 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLPXO76031 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLPXO76031 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.16■□□□□ 0.66
CLPXO76031 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.16■□□□□ 0.66
CLPXO76031 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLPXO76031 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLPXO76031 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.16■□□□□ 0.66
CLPXO76031 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLPXO76031 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLPXO76031 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLPXO76031 LINC01960-201ENST00000563759 1884 ntBASIC19.16■□□□□ 0.66
CLPXO76031 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CLPXO76031 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLPXO76031 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLPXO76031 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CLPXO76031 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLPXO76031 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLPXO76031 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CLPXO76031 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.15■□□□□ 0.66
CLPXO76031 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLPXO76031 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.15■□□□□ 0.66
CLPXO76031 AC120024.1-201ENST00000562672 995 ntBASIC19.15■□□□□ 0.66
CLPXO76031 AC103724.3-201ENST00000564481 992 ntBASIC19.15■□□□□ 0.66
CLPXO76031 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.15■□□□□ 0.66
CLPXO76031 AL031848.2-201ENST00000607670 837 ntBASIC19.15■□□□□ 0.66
CLPXO76031 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.15■□□□□ 0.66
CLPXO76031 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLPXO76031 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLPXO76031 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLPXO76031 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLPXO76031 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLPXO76031 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CLPXO76031 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLPXO76031 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLPXO76031 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLPXO76031 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
CLPXO76031 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.14■□□□□ 0.66
CLPXO76031 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
CLPXO76031 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CLPXO76031 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLPXO76031 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.14■□□□□ 0.65
CLPXO76031 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.14■□□□□ 0.65
CLPXO76031 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLPXO76031 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLPXO76031 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.14■□□□□ 0.65
CLPXO76031 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLPXO76031 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.14■□□□□ 0.65
CLPXO76031 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLPXO76031 AC018445.3-201ENST00000624177 1945 ntBASIC19.13■□□□□ 0.65
CLPXO76031 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLPXO76031 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms