Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PLOD3O60568 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.94■□□□□ 0.78
PLOD3O60568 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PLOD3O60568 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.94■□□□□ 0.78
PLOD3O60568 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PLOD3O60568 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.94■□□□□ 0.78
PLOD3O60568 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PLOD3O60568 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.94■□□□□ 0.78
PLOD3O60568 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PLOD3O60568 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PLOD3O60568 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PLOD3O60568 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PLOD3O60568 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PLOD3O60568 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PLOD3O60568 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PLOD3O60568 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PLOD3O60568 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.93■□□□□ 0.78
PLOD3O60568 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PLOD3O60568 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PLOD3O60568 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PLOD3O60568 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PLOD3O60568 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PLOD3O60568 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PLOD3O60568 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PLOD3O60568 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.93■□□□□ 0.78
PLOD3O60568 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
PLOD3O60568 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.93■□□□□ 0.78
PLOD3O60568 SLC25A24-204ENST00000569674 2357 ntBASIC19.92■□□□□ 0.78
PLOD3O60568 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PLOD3O60568 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PLOD3O60568 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PLOD3O60568 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.92■□□□□ 0.78
PLOD3O60568 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.92■□□□□ 0.78
PLOD3O60568 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PLOD3O60568 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PLOD3O60568 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PLOD3O60568 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PLOD3O60568 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PLOD3O60568 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
PLOD3O60568 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PLOD3O60568 AC244015.2-201ENST00000616358 1861 ntBASIC19.92■□□□□ 0.78
PLOD3O60568 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.92■□□□□ 0.78
PLOD3O60568 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.92■□□□□ 0.78
PLOD3O60568 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PLOD3O60568 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PLOD3O60568 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.91■□□□□ 0.78
PLOD3O60568 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PLOD3O60568 AC005224.4-201ENST00000583262 1652 ntBASIC19.91■□□□□ 0.78
PLOD3O60568 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.91■□□□□ 0.78
PLOD3O60568 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.91■□□□□ 0.78
PLOD3O60568 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.91■□□□□ 0.78
PLOD3O60568 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.91■□□□□ 0.78
PLOD3O60568 AC003102.1-202ENST00000563394 1796 ntBASIC19.91■□□□□ 0.78
PLOD3O60568 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.91■□□□□ 0.78
PLOD3O60568 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PLOD3O60568 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PLOD3O60568 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PLOD3O60568 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.91■□□□□ 0.78
PLOD3O60568 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.91■□□□□ 0.78
PLOD3O60568 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PLOD3O60568 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PLOD3O60568 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PLOD3O60568 AC104564.3-201ENST00000582367 638 ntBASIC19.91■□□□□ 0.78
PLOD3O60568 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PLOD3O60568 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.91■□□□□ 0.78
PLOD3O60568 AC055733.4-201ENST00000638462 1354 ntBASIC19.91■□□□□ 0.78
PLOD3O60568 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PLOD3O60568 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PLOD3O60568 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PLOD3O60568 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PLOD3O60568 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PLOD3O60568 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.9■□□□□ 0.78
PLOD3O60568 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PLOD3O60568 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.9■□□□□ 0.78
PLOD3O60568 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PLOD3O60568 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PLOD3O60568 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.9■□□□□ 0.78
PLOD3O60568 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.9■□□□□ 0.78
PLOD3O60568 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PLOD3O60568 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PLOD3O60568 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.9■□□□□ 0.78
PLOD3O60568 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PLOD3O60568 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PLOD3O60568 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PLOD3O60568 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.9■□□□□ 0.78
PLOD3O60568 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PLOD3O60568 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PLOD3O60568 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.9■□□□□ 0.78
PLOD3O60568 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.9■□□□□ 0.78
PLOD3O60568 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PLOD3O60568 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PLOD3O60568 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PLOD3O60568 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PLOD3O60568 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PLOD3O60568 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PLOD3O60568 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PLOD3O60568 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PLOD3O60568 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PLOD3O60568 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.89■□□□□ 0.77
PLOD3O60568 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms