Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSSCA1O60232 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSSCA1O60232 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.25■□□□□ 0.35
SSSCA1O60232 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSSCA1O60232 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SSSCA1O60232 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSSCA1O60232 OR7E47P-201ENST00000546390 1422 ntBASIC17.25■□□□□ 0.35
SSSCA1O60232 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSSCA1O60232 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSSCA1O60232 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.25■□□□□ 0.35
SSSCA1O60232 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.25■□□□□ 0.35
SSSCA1O60232 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SSSCA1O60232 AC137630.3-201ENST00000607245 391 ntBASIC17.25■□□□□ 0.35
SSSCA1O60232 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSSCA1O60232 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SSSCA1O60232 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSSCA1O60232 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SSSCA1O60232 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.25■□□□□ 0.35
SSSCA1O60232 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SSSCA1O60232 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSSCA1O60232 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSSCA1O60232 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SSSCA1O60232 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSSCA1O60232 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSSCA1O60232 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SSSCA1O60232 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SSSCA1O60232 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SSSCA1O60232 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSSCA1O60232 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSSCA1O60232 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.24■□□□□ 0.35
SSSCA1O60232 AC079089.2-201ENST00000531211 1277 ntBASIC17.24■□□□□ 0.35
SSSCA1O60232 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSSCA1O60232 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSSCA1O60232 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSSCA1O60232 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSSCA1O60232 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSSCA1O60232 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSSCA1O60232 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.23■□□□□ 0.35
SSSCA1O60232 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSSCA1O60232 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SSSCA1O60232 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.23■□□□□ 0.35
SSSCA1O60232 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSSCA1O60232 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SSSCA1O60232 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSSCA1O60232 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSSCA1O60232 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.23■□□□□ 0.35
SSSCA1O60232 AL049796.1-201ENST00000565336 1766 ntBASIC17.23■□□□□ 0.35
SSSCA1O60232 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSSCA1O60232 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SSSCA1O60232 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SSSCA1O60232 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSSCA1O60232 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.23■□□□□ 0.35
SSSCA1O60232 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SSSCA1O60232 ABHD17AP5-201ENST00000580133 923 ntBASIC17.23■□□□□ 0.35
SSSCA1O60232 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.23■□□□□ 0.35
SSSCA1O60232 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSSCA1O60232 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SSSCA1O60232 AC007952.6-201ENST00000573168 2673 ntBASIC17.23■□□□□ 0.35
SSSCA1O60232 AC003957.1-201ENST00000625108 2673 ntBASIC17.23■□□□□ 0.35
SSSCA1O60232 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSSCA1O60232 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSSCA1O60232 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.22■□□□□ 0.35
SSSCA1O60232 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.22■□□□□ 0.35
SSSCA1O60232 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSSCA1O60232 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSSCA1O60232 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSSCA1O60232 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSSCA1O60232 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSSCA1O60232 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.22■□□□□ 0.35
SSSCA1O60232 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SSSCA1O60232 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSSCA1O60232 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.22■□□□□ 0.35
SSSCA1O60232 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.22■□□□□ 0.35
SSSCA1O60232 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSSCA1O60232 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.22■□□□□ 0.35
SSSCA1O60232 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SSSCA1O60232 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SSSCA1O60232 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSSCA1O60232 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.22■□□□□ 0.35
SSSCA1O60232 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SSSCA1O60232 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSSCA1O60232 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
SSSCA1O60232 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SSSCA1O60232 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSSCA1O60232 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SSSCA1O60232 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SSSCA1O60232 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SSSCA1O60232 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSSCA1O60232 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSSCA1O60232 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SSSCA1O60232 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SSSCA1O60232 RNF165-205ENST00000588679 2904 ntBASIC17.21■□□□□ 0.35
SSSCA1O60232 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSSCA1O60232 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SSSCA1O60232 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSSCA1O60232 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSSCA1O60232 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.21■□□□□ 0.35
SSSCA1O60232 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SSSCA1O60232 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.21■□□□□ 0.35
SSSCA1O60232 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms