Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PEX1O43933 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PEX1O43933 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PEX1O43933 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PEX1O43933 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PEX1O43933 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.53■□□□□ 0.88
PEX1O43933 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PEX1O43933 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PEX1O43933 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PEX1O43933 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PEX1O43933 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PEX1O43933 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PEX1O43933 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PEX1O43933 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
PEX1O43933 AC136469.2-201ENST00000623944 1028 ntBASIC20.53■□□□□ 0.88
PEX1O43933 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.53■□□□□ 0.88
PEX1O43933 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.53■□□□□ 0.88
PEX1O43933 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PEX1O43933 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.53■□□□□ 0.88
PEX1O43933 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PEX1O43933 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PEX1O43933 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PEX1O43933 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.53■□□□□ 0.88
PEX1O43933 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PEX1O43933 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PEX1O43933 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PEX1O43933 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.52■□□□□ 0.88
PEX1O43933 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PEX1O43933 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PEX1O43933 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PEX1O43933 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PEX1O43933 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PEX1O43933 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PEX1O43933 AC091305.1-201ENST00000479476 895 ntBASIC20.52■□□□□ 0.88
PEX1O43933 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PEX1O43933 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.52■□□□□ 0.88
PEX1O43933 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PEX1O43933 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PEX1O43933 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
PEX1O43933 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
PEX1O43933 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PEX1O43933 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PEX1O43933 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PEX1O43933 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PEX1O43933 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
PEX1O43933 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PEX1O43933 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
PEX1O43933 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PEX1O43933 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PEX1O43933 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.51■□□□□ 0.87
PEX1O43933 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.51■□□□□ 0.87
PEX1O43933 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PEX1O43933 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PEX1O43933 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PEX1O43933 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PEX1O43933 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PEX1O43933 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PEX1O43933 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PEX1O43933 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.51■□□□□ 0.87
PEX1O43933 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.51■□□□□ 0.87
PEX1O43933 AC105265.2-201ENST00000467189 838 ntBASIC20.51■□□□□ 0.87
PEX1O43933 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.51■□□□□ 0.87
PEX1O43933 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.51■□□□□ 0.87
PEX1O43933 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.51■□□□□ 0.87
PEX1O43933 pRNA.6-201ENST00000610482 90 ntBASIC20.51■□□□□ 0.87
PEX1O43933 pRNA.5-201ENST00000612139 90 ntBASIC20.51■□□□□ 0.87
PEX1O43933 pRNA.11-201ENST00000618423 90 ntBASIC20.51■□□□□ 0.87
PEX1O43933 pRNA.13-201ENST00000619112 90 ntBASIC20.51■□□□□ 0.87
PEX1O43933 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.51■□□□□ 0.87
PEX1O43933 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PEX1O43933 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PEX1O43933 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX1O43933 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX1O43933 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PEX1O43933 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.5■□□□□ 0.87
PEX1O43933 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX1O43933 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PEX1O43933 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PEX1O43933 AC008764.7-201ENST00000593779 1081 ntBASIC20.5■□□□□ 0.87
PEX1O43933 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.5■□□□□ 0.87
PEX1O43933 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
PEX1O43933 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PEX1O43933 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
PEX1O43933 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
PEX1O43933 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX1O43933 AF106564.1-201ENST00000607058 2553 ntBASIC20.49■□□□□ 0.87
PEX1O43933 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PEX1O43933 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PEX1O43933 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PEX1O43933 RASA4CP-201ENST00000424092 1398 ntBASIC20.49■□□□□ 0.87
PEX1O43933 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PEX1O43933 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.49■□□□□ 0.87
PEX1O43933 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PEX1O43933 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PEX1O43933 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.49■□□□□ 0.87
PEX1O43933 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PEX1O43933 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.49■□□□□ 0.87
PEX1O43933 AC027682.1-201ENST00000562846 899 ntBASIC20.49■□□□□ 0.87
PEX1O43933 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PEX1O43933 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms