Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP2O43734 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP2O43734 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP2O43734 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP2O43734 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP2O43734 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.91■□□□□ 0.62
TRAF3IP2O43734 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP2O43734 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAF3IP2O43734 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAF3IP2O43734 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAF3IP2O43734 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAF3IP2O43734 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP2O43734 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP2O43734 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TRAF3IP2O43734 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP2O43734 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 Z98882.1-201ENST00000622160 2253 ntBASIC18.9■□□□□ 0.62
TRAF3IP2O43734 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP2O43734 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP2O43734 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP2O43734 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAF3IP2O43734 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP2O43734 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAF3IP2O43734 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP2O43734 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.89■□□□□ 0.61
TRAF3IP2O43734 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRAF3IP2O43734 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAF3IP2O43734 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAF3IP2O43734 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TRAF3IP2O43734 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP2O43734 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAF3IP2O43734 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAF3IP2O43734 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP2O43734 CLDN5-201ENST00000403084 2357 ntBASIC18.89■□□□□ 0.61
TRAF3IP2O43734 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP2O43734 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRAF3IP2O43734 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP2O43734 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAF3IP2O43734 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP2O43734 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP2O43734 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAF3IP2O43734 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP2O43734 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAF3IP2O43734 AC007375.3-201ENST00000600936 2314 ntBASIC18.88■□□□□ 0.61
TRAF3IP2O43734 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRAF3IP2O43734 YBX1P1-201ENST00000445822 960 ntBASIC18.88■□□□□ 0.61
TRAF3IP2O43734 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.88■□□□□ 0.61
TRAF3IP2O43734 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP2O43734 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP2O43734 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAF3IP2O43734 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP2O43734 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP2O43734 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP2O43734 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP2O43734 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP2O43734 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAF3IP2O43734 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRAF3IP2O43734 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAF3IP2O43734 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAF3IP2O43734 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TRAF3IP2O43734 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAF3IP2O43734 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TRAF3IP2O43734 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAF3IP2O43734 AC123595.1-201ENST00000440769 1046 ntBASIC18.87■□□□□ 0.61
TRAF3IP2O43734 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAF3IP2O43734 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAF3IP2O43734 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.87■□□□□ 0.61
TRAF3IP2O43734 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAF3IP2O43734 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAF3IP2O43734 LINC02228-203ENST00000641970 1355 ntBASIC18.87■□□□□ 0.61
TRAF3IP2O43734 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAF3IP2O43734 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 AC026310.3-201ENST00000625186 2373 ntBASIC18.86■□□□□ 0.61
TRAF3IP2O43734 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms