Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.56■□□□□ 0.72
TO15178 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TO15178 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.56■□□□□ 0.72
TO15178 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TO15178 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.56■□□□□ 0.72
TO15178 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TO15178 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TO15178 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.55■□□□□ 0.72
TO15178 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TO15178 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TO15178 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TO15178 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TO15178 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TO15178 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
TO15178 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.55■□□□□ 0.72
TO15178 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.55■□□□□ 0.72
TO15178 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.55■□□□□ 0.72
TO15178 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.55■□□□□ 0.72
TO15178 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TO15178 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TO15178 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TO15178 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TO15178 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TO15178 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TO15178 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.55■□□□□ 0.72
TO15178 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TO15178 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
TO15178 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TO15178 AC004854.2-201ENST00000608450 1441 ntBASIC19.54■□□□□ 0.72
TO15178 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TO15178 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
TO15178 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TO15178 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.54■□□□□ 0.72
TO15178 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TO15178 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.54■□□□□ 0.72
TO15178 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TO15178 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TO15178 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TO15178 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TO15178 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.54■□□□□ 0.72
TO15178 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TO15178 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TO15178 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.54■□□□□ 0.72
TO15178 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TO15178 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TO15178 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TO15178 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TO15178 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TO15178 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
TO15178 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TO15178 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.53■□□□□ 0.72
TO15178 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.53■□□□□ 0.72
TO15178 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.53■□□□□ 0.72
TO15178 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TO15178 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TO15178 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.53■□□□□ 0.72
TO15178 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.53■□□□□ 0.72
TO15178 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TO15178 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TO15178 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.53■□□□□ 0.72
TO15178 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.53■□□□□ 0.72
TO15178 NTF6G-201ENST00000591094 616 ntBASIC19.53■□□□□ 0.72
TO15178 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.53■□□□□ 0.72
TO15178 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TO15178 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TO15178 AC244015.2-201ENST00000616358 1861 ntBASIC19.53■□□□□ 0.72
TO15178 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TO15178 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TO15178 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TO15178 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TO15178 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TO15178 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TO15178 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TO15178 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TO15178 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TO15178 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TO15178 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.52■□□□□ 0.72
TO15178 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TO15178 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TO15178 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.52■□□□□ 0.72
TO15178 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.52■□□□□ 0.72
TO15178 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.52■□□□□ 0.72
TO15178 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.52■□□□□ 0.72
TO15178 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.52■□□□□ 0.72
TO15178 AC138907.5-202ENST00000569484 235 ntBASIC19.52■□□□□ 0.72
TO15178 KRT18P61-201ENST00000585825 1298 ntBASIC19.52■□□□□ 0.72
TO15178 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TO15178 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.52■□□□□ 0.72
TO15178 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.52■□□□□ 0.72
TO15178 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TO15178 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TO15178 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TO15178 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
TO15178 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TO15178 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TO15178 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.51■□□□□ 0.71
TO15178 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.51■□□□□ 0.71
TO15178 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TO15178 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.51■□□□□ 0.71
TO15178 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms