Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC24.35■■□□□ 1.49
ATP2A1O14983 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ATP2A1O14983 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
ATP2A1O14983 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
ATP2A1O14983 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.35■■□□□ 1.49
ATP2A1O14983 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ATP2A1O14983 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.35■■□□□ 1.49
ATP2A1O14983 BET1L-204ENST00000410108 637 ntTSL 3 BASIC24.35■■□□□ 1.49
ATP2A1O14983 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ATP2A1O14983 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC24.35■■□□□ 1.49
ATP2A1O14983 CD99P1-205ENST00000527459 561 ntBASIC24.35■■□□□ 1.49
ATP2A1O14983 RGMA-211ENST00000557420 989 ntTSL 3 BASIC24.35■■□□□ 1.49
ATP2A1O14983 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.35■■□□□ 1.49
ATP2A1O14983 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
ATP2A1O14983 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.35■■□□□ 1.49
ATP2A1O14983 OR10C1-204ENST00000622521 1039 ntBASIC24.35■■□□□ 1.49
ATP2A1O14983 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ATP2A1O14983 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC24.35■■□□□ 1.49
ATP2A1O14983 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
ATP2A1O14983 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ATP2A1O14983 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATP2A1O14983 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATP2A1O14983 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.34■■□□□ 1.49
ATP2A1O14983 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATP2A1O14983 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC24.34■■□□□ 1.49
ATP2A1O14983 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
ATP2A1O14983 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATP2A1O14983 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATP2A1O14983 KRT18P6-201ENST00000555540 1265 ntBASIC24.34■■□□□ 1.49
ATP2A1O14983 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.34■■□□□ 1.49
ATP2A1O14983 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.34■■□□□ 1.49
ATP2A1O14983 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.34■■□□□ 1.49
ATP2A1O14983 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.34■■□□□ 1.49
ATP2A1O14983 AC133041.1-202ENST00000642053 222 ntBASIC24.34■■□□□ 1.49
ATP2A1O14983 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
ATP2A1O14983 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATP2A1O14983 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
ATP2A1O14983 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ATP2A1O14983 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ATP2A1O14983 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
ATP2A1O14983 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
ATP2A1O14983 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
ATP2A1O14983 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ATP2A1O14983 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ATP2A1O14983 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ATP2A1O14983 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ATP2A1O14983 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ATP2A1O14983 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC24.33■■□□□ 1.49
ATP2A1O14983 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ATP2A1O14983 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ATP2A1O14983 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.48
ATP2A1O14983 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.33■■□□□ 1.48
ATP2A1O14983 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC24.32■■□□□ 1.48
ATP2A1O14983 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ATP2A1O14983 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC24.32■■□□□ 1.48
ATP2A1O14983 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ATP2A1O14983 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC24.32■■□□□ 1.48
ATP2A1O14983 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ATP2A1O14983 AL512625.2-201ENST00000417533 625 ntBASIC24.32■■□□□ 1.48
ATP2A1O14983 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ATP2A1O14983 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC24.32■■□□□ 1.48
ATP2A1O14983 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
ATP2A1O14983 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC24.32■■□□□ 1.48
ATP2A1O14983 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
ATP2A1O14983 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.32■■□□□ 1.48
ATP2A1O14983 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ATP2A1O14983 RARG-204ENST00000543726 1779 ntTSL 2 BASIC24.31■■□□□ 1.48
ATP2A1O14983 AC003102.1-202ENST00000563394 1796 ntBASIC24.31■■□□□ 1.48
ATP2A1O14983 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC24.31■■□□□ 1.48
ATP2A1O14983 AC092053.2-201ENST00000640557 1818 ntBASIC24.31■■□□□ 1.48
ATP2A1O14983 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
ATP2A1O14983 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ATP2A1O14983 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
ATP2A1O14983 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
ATP2A1O14983 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.31■■□□□ 1.48
ATP2A1O14983 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ATP2A1O14983 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.31■■□□□ 1.48
ATP2A1O14983 AL162412.1-201ENST00000567129 965 ntBASIC24.31■■□□□ 1.48
ATP2A1O14983 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
ATP2A1O14983 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC24.31■■□□□ 1.48
ATP2A1O14983 AC243732.1-201ENST00000612648 864 ntBASIC24.31■■□□□ 1.48
ATP2A1O14983 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.31■■□□□ 1.48
ATP2A1O14983 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC24.31■■□□□ 1.48
ATP2A1O14983 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ATP2A1O14983 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ATP2A1O14983 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.31■■□□□ 1.48
ATP2A1O14983 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC24.31■■□□□ 1.48
ATP2A1O14983 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.3■■□□□ 1.48
ATP2A1O14983 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC24.3■■□□□ 1.48
ATP2A1O14983 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC24.3■■□□□ 1.48
ATP2A1O14983 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ATP2A1O14983 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.3■■□□□ 1.48
ATP2A1O14983 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ATP2A1O14983 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC24.3■■□□□ 1.48
ATP2A1O14983 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
ATP2A1O14983 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
ATP2A1O14983 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ATP2A1O14983 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
ATP2A1O14983 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC24.3■■□□□ 1.48
ATP2A1O14983 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms