Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SDHDO14521 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SDHDO14521 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDHDO14521 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SDHDO14521 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.49■□□□□ 0.87
SDHDO14521 MIR3621-201ENST00000580529 85 ntBASIC20.49■□□□□ 0.87
SDHDO14521 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.49■□□□□ 0.87
SDHDO14521 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SDHDO14521 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SDHDO14521 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SDHDO14521 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SDHDO14521 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SDHDO14521 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SDHDO14521 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.48■□□□□ 0.87
SDHDO14521 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SDHDO14521 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.48■□□□□ 0.87
SDHDO14521 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.48■□□□□ 0.87
SDHDO14521 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.48■□□□□ 0.87
SDHDO14521 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SDHDO14521 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.48■□□□□ 0.87
SDHDO14521 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SDHDO14521 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SDHDO14521 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SDHDO14521 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SDHDO14521 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.47■□□□□ 0.87
SDHDO14521 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.47■□□□□ 0.87
SDHDO14521 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SDHDO14521 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SDHDO14521 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SDHDO14521 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.47■□□□□ 0.87
SDHDO14521 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.47■□□□□ 0.87
SDHDO14521 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.47■□□□□ 0.87
SDHDO14521 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SDHDO14521 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.47■□□□□ 0.87
SDHDO14521 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SDHDO14521 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SDHDO14521 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.47■□□□□ 0.87
SDHDO14521 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHDO14521 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHDO14521 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHDO14521 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
SDHDO14521 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SDHDO14521 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHDO14521 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHDO14521 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHDO14521 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHDO14521 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHDO14521 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHDO14521 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
SDHDO14521 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHDO14521 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHDO14521 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHDO14521 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.46■□□□□ 0.87
SDHDO14521 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SDHDO14521 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHDO14521 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDHDO14521 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.46■□□□□ 0.87
SDHDO14521 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SDHDO14521 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SDHDO14521 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
SDHDO14521 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SDHDO14521 AC092667.1-201ENST00000434301 2586 ntBASIC20.45■□□□□ 0.86
SDHDO14521 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SDHDO14521 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SDHDO14521 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SDHDO14521 SRD5A1P1-201ENST00000442297 786 ntBASIC20.45■□□□□ 0.86
SDHDO14521 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SDHDO14521 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.45■□□□□ 0.86
SDHDO14521 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SDHDO14521 AL512631.2-201ENST00000604634 923 ntBASIC20.45■□□□□ 0.86
SDHDO14521 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SDHDO14521 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SDHDO14521 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SDHDO14521 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SDHDO14521 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SDHDO14521 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
SDHDO14521 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.44■□□□□ 0.86
SDHDO14521 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SDHDO14521 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SDHDO14521 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SDHDO14521 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.44■□□□□ 0.86
SDHDO14521 AC092171.4-201ENST00000609130 632 ntBASIC20.44■□□□□ 0.86
SDHDO14521 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SDHDO14521 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SDHDO14521 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SDHDO14521 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.44■□□□□ 0.86
SDHDO14521 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SDHDO14521 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SDHDO14521 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SDHDO14521 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SDHDO14521 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SDHDO14521 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SDHDO14521 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SDHDO14521 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
SDHDO14521 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SDHDO14521 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.43■□□□□ 0.86
SDHDO14521 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SDHDO14521 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SDHDO14521 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
SDHDO14521 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms