Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN4O14493 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN4O14493 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN4O14493 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
CLDN4O14493 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
CLDN4O14493 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN4O14493 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.98■□□□□ 0.79
CLDN4O14493 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.98■□□□□ 0.79
CLDN4O14493 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CLDN4O14493 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN4O14493 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.98■□□□□ 0.79
CLDN4O14493 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.98■□□□□ 0.79
CLDN4O14493 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
CLDN4O14493 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN4O14493 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.98■□□□□ 0.79
CLDN4O14493 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN4O14493 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CLDN4O14493 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN4O14493 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CLDN4O14493 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.97■□□□□ 0.79
CLDN4O14493 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.97■□□□□ 0.79
CLDN4O14493 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN4O14493 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN4O14493 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.97■□□□□ 0.79
CLDN4O14493 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CLDN4O14493 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CLDN4O14493 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN4O14493 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN4O14493 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.97■□□□□ 0.79
CLDN4O14493 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN4O14493 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN4O14493 AC026471.6-201ENST00000622954 1905 ntBASIC19.96■□□□□ 0.79
CLDN4O14493 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN4O14493 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN4O14493 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.96■□□□□ 0.79
CLDN4O14493 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.96■□□□□ 0.79
CLDN4O14493 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN4O14493 KRT19P1-201ENST00000405746 1186 ntBASIC19.96■□□□□ 0.79
CLDN4O14493 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.96■□□□□ 0.79
CLDN4O14493 AL162430.1-201ENST00000480705 870 ntBASIC19.96■□□□□ 0.79
CLDN4O14493 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.96■□□□□ 0.79
CLDN4O14493 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.96■□□□□ 0.79
CLDN4O14493 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
CLDN4O14493 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.96■□□□□ 0.79
CLDN4O14493 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.96■□□□□ 0.79
CLDN4O14493 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
CLDN4O14493 AP004607.4-201ENST00000530158 1459 ntBASIC19.96■□□□□ 0.79
CLDN4O14493 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN4O14493 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN4O14493 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN4O14493 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN4O14493 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN4O14493 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CLDN4O14493 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.95■□□□□ 0.78
CLDN4O14493 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CLDN4O14493 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.95■□□□□ 0.78
CLDN4O14493 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.95■□□□□ 0.78
CLDN4O14493 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN4O14493 AC053503.5-201ENST00000601508 636 ntBASIC19.95■□□□□ 0.78
CLDN4O14493 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.95■□□□□ 0.78
CLDN4O14493 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN4O14493 AC010542.4-201ENST00000563151 1910 ntBASIC19.95■□□□□ 0.78
CLDN4O14493 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CLDN4O14493 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN4O14493 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CLDN4O14493 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN4O14493 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.94■□□□□ 0.78
CLDN4O14493 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN4O14493 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN4O14493 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN4O14493 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN4O14493 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN4O14493 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN4O14493 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
CLDN4O14493 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.94■□□□□ 0.78
CLDN4O14493 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.94■□□□□ 0.78
CLDN4O14493 KRT18P5-201ENST00000436075 1291 ntBASIC19.94■□□□□ 0.78
CLDN4O14493 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.94■□□□□ 0.78
CLDN4O14493 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.94■□□□□ 0.78
CLDN4O14493 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN4O14493 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN4O14493 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CLDN4O14493 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CLDN4O14493 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN4O14493 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN4O14493 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN4O14493 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN4O14493 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN4O14493 AC004854.2-201ENST00000608450 1441 ntBASIC19.93■□□□□ 0.78
CLDN4O14493 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN4O14493 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN4O14493 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.93■□□□□ 0.78
CLDN4O14493 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CLDN4O14493 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN4O14493 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.93■□□□□ 0.78
CLDN4O14493 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN4O14493 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.93■□□□□ 0.78
CLDN4O14493 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.93■□□□□ 0.78
CLDN4O14493 EEF1DP3-203ENST00000566025 782 ntBASIC19.93■□□□□ 0.78
CLDN4O14493 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms