Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TLR4O00206 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TLR4O00206 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TLR4O00206 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.02■□□□□ 0.96
TLR4O00206 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
TLR4O00206 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TLR4O00206 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.02■□□□□ 0.96
TLR4O00206 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TLR4O00206 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.02■□□□□ 0.96
TLR4O00206 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.02■□□□□ 0.96
TLR4O00206 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.02■□□□□ 0.96
TLR4O00206 TERF1P5-201ENST00000477545 1207 ntBASIC21.02■□□□□ 0.96
TLR4O00206 AC013268.1-206ENST00000638368 961 ntBASIC21.02■□□□□ 0.96
TLR4O00206 AC112229.1-201ENST00000639295 961 ntBASIC21.02■□□□□ 0.96
TLR4O00206 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.02■□□□□ 0.96
TLR4O00206 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TLR4O00206 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TLR4O00206 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TLR4O00206 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TLR4O00206 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TLR4O00206 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.01■□□□□ 0.95
TLR4O00206 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TLR4O00206 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TLR4O00206 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.01■□□□□ 0.95
TLR4O00206 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TLR4O00206 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TLR4O00206 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.01■□□□□ 0.95
TLR4O00206 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
TLR4O00206 KRT18P6-201ENST00000555540 1265 ntBASIC21.01■□□□□ 0.95
TLR4O00206 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.01■□□□□ 0.95
TLR4O00206 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TLR4O00206 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.01■□□□□ 0.95
TLR4O00206 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.01■□□□□ 0.95
TLR4O00206 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.01■□□□□ 0.95
TLR4O00206 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TLR4O00206 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.01■□□□□ 0.95
TLR4O00206 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TLR4O00206 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TLR4O00206 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TLR4O00206 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.01■□□□□ 0.95
TLR4O00206 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.01■□□□□ 0.95
TLR4O00206 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TLR4O00206 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TLR4O00206 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TLR4O00206 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21■□□□□ 0.95
TLR4O00206 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TLR4O00206 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21■□□□□ 0.95
TLR4O00206 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TLR4O00206 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21■□□□□ 0.95
TLR4O00206 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TLR4O00206 TMEM191A-211ENST00000637163 1067 ntBASIC21■□□□□ 0.95
TLR4O00206 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TLR4O00206 AC137767.1-201ENST00000602918 1920 ntBASIC21■□□□□ 0.95
TLR4O00206 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TLR4O00206 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TLR4O00206 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21■□□□□ 0.95
TLR4O00206 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TLR4O00206 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR4O00206 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR4O00206 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR4O00206 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TLR4O00206 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TLR4O00206 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR4O00206 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TLR4O00206 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.99■□□□□ 0.95
TLR4O00206 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR4O00206 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR4O00206 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR4O00206 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR4O00206 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.99■□□□□ 0.95
TLR4O00206 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR4O00206 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
TLR4O00206 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.99■□□□□ 0.95
TLR4O00206 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TLR4O00206 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.98■□□□□ 0.95
TLR4O00206 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TLR4O00206 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.98■□□□□ 0.95
TLR4O00206 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TLR4O00206 AC087742.1-201ENST00000575880 1738 ntBASIC20.98■□□□□ 0.95
TLR4O00206 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TLR4O00206 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TLR4O00206 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TLR4O00206 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.98■□□□□ 0.95
TLR4O00206 AC069152.1-201ENST00000438030 544 ntBASIC20.98■□□□□ 0.95
TLR4O00206 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.98■□□□□ 0.95
TLR4O00206 AC133041.1-202ENST00000642053 222 ntBASIC20.98■□□□□ 0.95
TLR4O00206 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TLR4O00206 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TLR4O00206 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TLR4O00206 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.98■□□□□ 0.95
TLR4O00206 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TLR4O00206 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TLR4O00206 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TLR4O00206 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TLR4O00206 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.97■□□□□ 0.95
TLR4O00206 TSPY20P-201ENST00000450910 630 ntBASIC20.97■□□□□ 0.95
TLR4O00206 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TLR4O00206 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
TLR4O00206 AL117328.2-201ENST00000624617 1940 ntBASIC20.97■□□□□ 0.95
TLR4O00206 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms