Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.84■□□□□ 0.61
NPIPB4C9JG80 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NPIPB4C9JG80 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPB4C9JG80 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPB4C9JG80 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.84■□□□□ 0.61
NPIPB4C9JG80 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.84■□□□□ 0.61
NPIPB4C9JG80 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPB4C9JG80 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPB4C9JG80 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPB4C9JG80 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.84■□□□□ 0.61
NPIPB4C9JG80 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPB4C9JG80 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPB4C9JG80 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPB4C9JG80 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPIPB4C9JG80 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPIPB4C9JG80 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
NPIPB4C9JG80 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPIPB4C9JG80 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPIPB4C9JG80 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NPIPB4C9JG80 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NPIPB4C9JG80 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.83■□□□□ 0.61
NPIPB4C9JG80 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
NPIPB4C9JG80 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPIPB4C9JG80 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPIPB4C9JG80 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NPIPB4C9JG80 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.83■□□□□ 0.6
NPIPB4C9JG80 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NPIPB4C9JG80 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.83■□□□□ 0.6
NPIPB4C9JG80 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NPIPB4C9JG80 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPIPB4C9JG80 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPIPB4C9JG80 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.83■□□□□ 0.6
NPIPB4C9JG80 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.83■□□□□ 0.6
NPIPB4C9JG80 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NPIPB4C9JG80 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPIPB4C9JG80 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NPIPB4C9JG80 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.82■□□□□ 0.6
NPIPB4C9JG80 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPB4C9JG80 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPB4C9JG80 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPB4C9JG80 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPB4C9JG80 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.82■□□□□ 0.6
NPIPB4C9JG80 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPB4C9JG80 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPB4C9JG80 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.82■□□□□ 0.6
NPIPB4C9JG80 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.82■□□□□ 0.6
NPIPB4C9JG80 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPB4C9JG80 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPB4C9JG80 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
NPIPB4C9JG80 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.82■□□□□ 0.6
NPIPB4C9JG80 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPB4C9JG80 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.81■□□□□ 0.6
NPIPB4C9JG80 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPB4C9JG80 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPB4C9JG80 MIR638-201ENST00000385237 100 ntBASIC18.81■□□□□ 0.6
NPIPB4C9JG80 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.81■□□□□ 0.6
NPIPB4C9JG80 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.81■□□□□ 0.6
NPIPB4C9JG80 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPB4C9JG80 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPB4C9JG80 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.81■□□□□ 0.6
NPIPB4C9JG80 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPB4C9JG80 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NPIPB4C9JG80 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPB4C9JG80 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.8■□□□□ 0.6
NPIPB4C9JG80 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.8■□□□□ 0.6
NPIPB4C9JG80 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NPIPB4C9JG80 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPB4C9JG80 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPB4C9JG80 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPB4C9JG80 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPB4C9JG80 AL024507.2-201ENST00000606070 2574 ntBASIC18.8■□□□□ 0.6
NPIPB4C9JG80 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPB4C9JG80 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NPIPB4C9JG80 IRS3P-201ENST00000223076 1006 ntBASIC18.8■□□□□ 0.6
NPIPB4C9JG80 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.8■□□□□ 0.6
NPIPB4C9JG80 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.8■□□□□ 0.6
NPIPB4C9JG80 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPB4C9JG80 EEF1DP3-203ENST00000566025 782 ntBASIC18.8■□□□□ 0.6
NPIPB4C9JG80 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.8■□□□□ 0.6
NPIPB4C9JG80 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.8■□□□□ 0.6
NPIPB4C9JG80 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPB4C9JG80 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPB4C9JG80 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NPIPB4C9JG80 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPB4C9JG80 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.8■□□□□ 0.6
NPIPB4C9JG80 AL137060.1-201ENST00000618151 2648 ntBASIC18.8■□□□□ 0.6
NPIPB4C9JG80 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.79■□□□□ 0.6
NPIPB4C9JG80 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPB4C9JG80 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.79■□□□□ 0.6
NPIPB4C9JG80 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NPIPB4C9JG80 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.79■□□□□ 0.6
NPIPB4C9JG80 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.79■□□□□ 0.6
NPIPB4C9JG80 AC027612.3-201ENST00000413684 1047 ntBASIC18.79■□□□□ 0.6
NPIPB4C9JG80 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.79■□□□□ 0.6
NPIPB4C9JG80 AC053503.5-201ENST00000601508 636 ntBASIC18.79■□□□□ 0.6
NPIPB4C9JG80 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.79■□□□□ 0.6
NPIPB4C9JG80 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.79■□□□□ 0.6
NPIPB4C9JG80 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.79■□□□□ 0.6
NPIPB4C9JG80 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPB4C9JG80 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms