Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LYRM9A8MSI8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYRM9A8MSI8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.14■□□□□ 0.01
LYRM9A8MSI8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYRM9A8MSI8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYRM9A8MSI8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYRM9A8MSI8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.14■□□□□ 0.01
LYRM9A8MSI8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYRM9A8MSI8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LYRM9A8MSI8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LYRM9A8MSI8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.14■□□□□ 0.01
LYRM9A8MSI8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.14■□□□□ 0.01
LYRM9A8MSI8 EEF1DP3-203ENST00000566025 782 ntBASIC15.14■□□□□ 0.01
LYRM9A8MSI8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
LYRM9A8MSI8 NTF6G-201ENST00000591094 616 ntBASIC15.14■□□□□ 0.01
LYRM9A8MSI8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LYRM9A8MSI8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LYRM9A8MSI8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYRM9A8MSI8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC15.14■□□□□ 0.01
LYRM9A8MSI8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LYRM9A8MSI8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LYRM9A8MSI8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LYRM9A8MSI8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYRM9A8MSI8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYRM9A8MSI8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYRM9A8MSI8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYRM9A8MSI8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYRM9A8MSI8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYRM9A8MSI8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYRM9A8MSI8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYRM9A8MSI8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYRM9A8MSI8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LYRM9A8MSI8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LYRM9A8MSI8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.12■□□□□ 0.01
LYRM9A8MSI8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.12■□□□□ 0.01
LYRM9A8MSI8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.12■□□□□ 0.01
LYRM9A8MSI8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.12■□□□□ 0.01
LYRM9A8MSI8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.12■□□□□ 0.01
LYRM9A8MSI8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.12■□□□□ 0.01
LYRM9A8MSI8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYRM9A8MSI8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC15.12■□□□□ 0.01
LYRM9A8MSI8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.12■□□□□ 0.01
LYRM9A8MSI8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 AC079834.2-201ENST00000609776 1949 ntBASIC15.11■□□□□ 0.01
LYRM9A8MSI8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 AL162430.1-201ENST00000480705 870 ntBASIC15.11■□□□□ 0.01
LYRM9A8MSI8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 AC138907.5-202ENST00000569484 235 ntBASIC15.11■□□□□ 0.01
LYRM9A8MSI8 AC008175.2-201ENST00000612840 297 ntBASIC15.11■□□□□ 0.01
LYRM9A8MSI8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 AP004607.4-201ENST00000530158 1459 ntBASIC15.11■□□□□ 0.01
LYRM9A8MSI8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM9A8MSI8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
LYRM9A8MSI8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LYRM9A8MSI8 AC004854.2-201ENST00000608450 1441 ntBASIC15.1■□□□□ 0.01
LYRM9A8MSI8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM9A8MSI8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LYRM9A8MSI8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.1■□□□□ 0.01
LYRM9A8MSI8 AC010542.4-201ENST00000563151 1910 ntBASIC15.1■□□□□ 0.01
LYRM9A8MSI8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM9A8MSI8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.1■□□□□ 0.01
LYRM9A8MSI8 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms