Protein–RNA interactions for Protein: A6NLE4

SMIM23, Small integral membrane protein 23, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23A6NLE4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
SMIM23A6NLE4 AC079089.2-201ENST00000531211 1277 ntBASIC21.64■■□□□ 1.05
SMIM23A6NLE4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMIM23A6NLE4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.64■■□□□ 1.05
SMIM23A6NLE4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SMIM23A6NLE4 OR7E47P-201ENST00000546390 1422 ntBASIC21.63■■□□□ 1.05
SMIM23A6NLE4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.63■■□□□ 1.05
SMIM23A6NLE4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SMIM23A6NLE4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMIM23A6NLE4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMIM23A6NLE4 AL391422.3-201ENST00000603791 2761 ntBASIC21.63■■□□□ 1.05
SMIM23A6NLE4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMIM23A6NLE4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
SMIM23A6NLE4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SMIM23A6NLE4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.63■■□□□ 1.05
SMIM23A6NLE4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMIM23A6NLE4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMIM23A6NLE4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMIM23A6NLE4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMIM23A6NLE4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.63■■□□□ 1.05
SMIM23A6NLE4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SMIM23A6NLE4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 BX664725.1-201ENST00000438252 379 ntBASIC21.62■■□□□ 1.05
SMIM23A6NLE4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
SMIM23A6NLE4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
SMIM23A6NLE4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SMIM23A6NLE4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SMIM23A6NLE4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMIM23A6NLE4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.61■■□□□ 1.05
SMIM23A6NLE4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.61■■□□□ 1.05
SMIM23A6NLE4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMIM23A6NLE4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMIM23A6NLE4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMIM23A6NLE4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMIM23A6NLE4 RNF165-205ENST00000588679 2904 ntBASIC21.61■■□□□ 1.05
SMIM23A6NLE4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SMIM23A6NLE4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.61■■□□□ 1.05
SMIM23A6NLE4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.61■■□□□ 1.05
SMIM23A6NLE4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMIM23A6NLE4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMIM23A6NLE4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SMIM23A6NLE4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.61■■□□□ 1.05
SMIM23A6NLE4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.61■■□□□ 1.05
SMIM23A6NLE4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 AL499627.2-201ENST00000606283 725 ntBASIC21.6■■□□□ 1.05
SMIM23A6NLE4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM23A6NLE4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.59■■□□□ 1.05
SMIM23A6NLE4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMIM23A6NLE4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMIM23A6NLE4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMIM23A6NLE4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.59■■□□□ 1.05
SMIM23A6NLE4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms