Protein–RNA interactions for Protein: A6NKL6

TMEM200C, Transmembrane protein 200C, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200CA6NKL6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM200CA6NKL6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM200CA6NKL6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.67■□□□□ 0.74
TMEM200CA6NKL6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TMEM200CA6NKL6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM200CA6NKL6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM200CA6NKL6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TMEM200CA6NKL6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM200CA6NKL6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM200CA6NKL6 AC004911.1-201ENST00000416316 871 ntBASIC19.66■□□□□ 0.74
TMEM200CA6NKL6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.66■□□□□ 0.74
TMEM200CA6NKL6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM200CA6NKL6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
TMEM200CA6NKL6 AC137761.2-201ENST00000561729 223 ntBASIC19.66■□□□□ 0.74
TMEM200CA6NKL6 AC145350.3-201ENST00000569033 163 ntBASIC19.66■□□□□ 0.74
TMEM200CA6NKL6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM200CA6NKL6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM200CA6NKL6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEM200CA6NKL6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM200CA6NKL6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.66■□□□□ 0.74
TMEM200CA6NKL6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM200CA6NKL6 FAM99A-202ENST00000538190 1989 ntBASIC19.66■□□□□ 0.74
TMEM200CA6NKL6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM200CA6NKL6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM200CA6NKL6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM200CA6NKL6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
TMEM200CA6NKL6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.65■□□□□ 0.74
TMEM200CA6NKL6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM200CA6NKL6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM200CA6NKL6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM200CA6NKL6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM200CA6NKL6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.65■□□□□ 0.74
TMEM200CA6NKL6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.65■□□□□ 0.74
TMEM200CA6NKL6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM200CA6NKL6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM200CA6NKL6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM200CA6NKL6 ECEL1P1-201ENST00000373592 1742 ntBASIC19.65■□□□□ 0.74
TMEM200CA6NKL6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM200CA6NKL6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM200CA6NKL6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TMEM200CA6NKL6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TMEM200CA6NKL6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TMEM200CA6NKL6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM200CA6NKL6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM200CA6NKL6 AC138907.5-202ENST00000569484 235 ntBASIC19.64■□□□□ 0.73
TMEM200CA6NKL6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM200CA6NKL6 AC053503.5-201ENST00000601508 636 ntBASIC19.64■□□□□ 0.73
TMEM200CA6NKL6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.64■□□□□ 0.73
TMEM200CA6NKL6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM200CA6NKL6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM200CA6NKL6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM200CA6NKL6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM200CA6NKL6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM200CA6NKL6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM200CA6NKL6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM200CA6NKL6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM200CA6NKL6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TMEM200CA6NKL6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TMEM200CA6NKL6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM200CA6NKL6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM200CA6NKL6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM200CA6NKL6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM200CA6NKL6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.63■□□□□ 0.73
TMEM200CA6NKL6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.63■□□□□ 0.73
TMEM200CA6NKL6 AP001160.3-201ENST00000601484 763 ntBASIC19.63■□□□□ 0.73
TMEM200CA6NKL6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.63■□□□□ 0.73
TMEM200CA6NKL6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TMEM200CA6NKL6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM200CA6NKL6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM200CA6NKL6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM200CA6NKL6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TMEM200CA6NKL6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM200CA6NKL6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM200CA6NKL6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM200CA6NKL6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM200CA6NKL6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM200CA6NKL6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM200CA6NKL6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM200CA6NKL6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.62■□□□□ 0.73
TMEM200CA6NKL6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TMEM200CA6NKL6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.62■□□□□ 0.73
TMEM200CA6NKL6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM200CA6NKL6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.62■□□□□ 0.73
TMEM200CA6NKL6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TMEM200CA6NKL6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM200CA6NKL6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM200CA6NKL6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM200CA6NKL6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TMEM200CA6NKL6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM200CA6NKL6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM200CA6NKL6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.61■□□□□ 0.73
TMEM200CA6NKL6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.61■□□□□ 0.73
TMEM200CA6NKL6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM200CA6NKL6 AC010542.4-201ENST00000563151 1910 ntBASIC19.61■□□□□ 0.73
TMEM200CA6NKL6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM200CA6NKL6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM200CA6NKL6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM200CA6NKL6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM200CA6NKL6 AC010141.2-201ENST00000452426 721 ntBASIC19.61■□□□□ 0.73
TMEM200CA6NKL6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms