Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 SMG8-203ENST00000578922 2178 ntBASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 LINC01529-204ENST00000636474 1715 ntBASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.74■□□□□ 0.27
RBFOX3A6NFN3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.73■□□□□ 0.27
RBFOX3A6NFN3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RBFOX3A6NFN3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RBFOX3A6NFN3 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.73■□□□□ 0.27
RBFOX3A6NFN3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RBFOX3A6NFN3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RBFOX3A6NFN3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RBFOX3A6NFN3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RBFOX3A6NFN3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RBFOX3A6NFN3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RBFOX3A6NFN3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RBFOX3A6NFN3 BX323043.1-201ENST00000641006 1765 ntBASIC16.73■□□□□ 0.27
RBFOX3A6NFN3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.73■□□□□ 0.27
RBFOX3A6NFN3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RBFOX3A6NFN3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RBFOX3A6NFN3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.73■□□□□ 0.27
RBFOX3A6NFN3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RBFOX3A6NFN3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.72■□□□□ 0.27
RBFOX3A6NFN3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBFOX3A6NFN3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RBFOX3A6NFN3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RBFOX3A6NFN3 C17orf82-201ENST00000623772 1530 ntBASIC16.7■□□□□ 0.26
RBFOX3A6NFN3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.7■□□□□ 0.26
RBFOX3A6NFN3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RBFOX3A6NFN3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.7■□□□□ 0.26
RBFOX3A6NFN3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RBFOX3A6NFN3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RBFOX3A6NFN3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RBFOX3A6NFN3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RBFOX3A6NFN3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RBFOX3A6NFN3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms