Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
TBC1D3BA6NDS4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TBC1D3BA6NDS4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.59■■□□□ 1.05
TBC1D3BA6NDS4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TBC1D3BA6NDS4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
TBC1D3BA6NDS4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TBC1D3BA6NDS4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.59■■□□□ 1.05
TBC1D3BA6NDS4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TBC1D3BA6NDS4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TBC1D3BA6NDS4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
TBC1D3BA6NDS4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TBC1D3BA6NDS4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TBC1D3BA6NDS4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.58■■□□□ 1.05
TBC1D3BA6NDS4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TBC1D3BA6NDS4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
TBC1D3BA6NDS4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TBC1D3BA6NDS4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
TBC1D3BA6NDS4 KRT18P6-201ENST00000555540 1265 ntBASIC21.58■■□□□ 1.05
TBC1D3BA6NDS4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.58■■□□□ 1.05
TBC1D3BA6NDS4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TBC1D3BA6NDS4 AC008694.1-202ENST00000636953 945 ntBASIC21.58■■□□□ 1.05
TBC1D3BA6NDS4 AC133041.1-202ENST00000642053 222 ntBASIC21.58■■□□□ 1.05
TBC1D3BA6NDS4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TBC1D3BA6NDS4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.58■■□□□ 1.05
TBC1D3BA6NDS4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.58■■□□□ 1.04
TBC1D3BA6NDS4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TBC1D3BA6NDS4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TBC1D3BA6NDS4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
TBC1D3BA6NDS4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
TBC1D3BA6NDS4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.57■■□□□ 1.04
TBC1D3BA6NDS4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TBC1D3BA6NDS4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
TBC1D3BA6NDS4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.57■■□□□ 1.04
TBC1D3BA6NDS4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TBC1D3BA6NDS4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TBC1D3BA6NDS4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.57■■□□□ 1.04
TBC1D3BA6NDS4 CYP2T1P-201ENST00000432607 1285 ntBASIC21.57■■□□□ 1.04
TBC1D3BA6NDS4 AC069152.1-201ENST00000438030 544 ntBASIC21.57■■□□□ 1.04
TBC1D3BA6NDS4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.57■■□□□ 1.04
TBC1D3BA6NDS4 AC007322.4-201ENST00000509611 723 ntBASIC21.57■■□□□ 1.04
TBC1D3BA6NDS4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.57■■□□□ 1.04
TBC1D3BA6NDS4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.57■■□□□ 1.04
TBC1D3BA6NDS4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.57■■□□□ 1.04
TBC1D3BA6NDS4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.57■■□□□ 1.04
TBC1D3BA6NDS4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TBC1D3BA6NDS4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TBC1D3BA6NDS4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.56■■□□□ 1.04
TBC1D3BA6NDS4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.56■■□□□ 1.04
TBC1D3BA6NDS4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TBC1D3BA6NDS4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TBC1D3BA6NDS4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TBC1D3BA6NDS4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.56■■□□□ 1.04
TBC1D3BA6NDS4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TBC1D3BA6NDS4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TBC1D3BA6NDS4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TBC1D3BA6NDS4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
TBC1D3BA6NDS4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.56■■□□□ 1.04
TBC1D3BA6NDS4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.56■■□□□ 1.04
TBC1D3BA6NDS4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.56■■□□□ 1.04
TBC1D3BA6NDS4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
TBC1D3BA6NDS4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TBC1D3BA6NDS4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TBC1D3BA6NDS4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TBC1D3BA6NDS4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TBC1D3BA6NDS4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.55■■□□□ 1.04
TBC1D3BA6NDS4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3BA6NDS4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3BA6NDS4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3BA6NDS4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.55■■□□□ 1.04
TBC1D3BA6NDS4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TBC1D3BA6NDS4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.55■■□□□ 1.04
TBC1D3BA6NDS4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
TBC1D3BA6NDS4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3BA6NDS4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3BA6NDS4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3BA6NDS4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3BA6NDS4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3BA6NDS4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TBC1D3BA6NDS4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 TSPY20P-201ENST00000450910 630 ntBASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 AC069236.1-201ENST00000604339 616 ntBASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 TMEM191A-211ENST00000637163 1067 ntBASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 MKRN4P-201ENST00000444706 1521 ntBASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.54■■□□□ 1.04
TBC1D3BA6NDS4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms