Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV8-4A0A0B4J246 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-4A0A0B4J246 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-4A0A0B4J246 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-4A0A0B4J246 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-4A0A0B4J246 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAV8-4A0A0B4J246 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-4A0A0B4J246 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV8-4A0A0B4J246 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TRAV8-4A0A0B4J246 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV8-4A0A0B4J246 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV8-4A0A0B4J246 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV8-4A0A0B4J246 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV8-4A0A0B4J246 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV8-4A0A0B4J246 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV8-4A0A0B4J246 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV8-4A0A0B4J246 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRAV8-4A0A0B4J246 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV8-4A0A0B4J246 AL356441.2-201ENST00000443009 864 ntBASIC14.77□□□□□ -0.05
TRAV8-4A0A0B4J246 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV8-4A0A0B4J246 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC14.77□□□□□ -0.05
TRAV8-4A0A0B4J246 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV8-4A0A0B4J246 AC068587.7-201ENST00000641602 218 ntBASIC14.77□□□□□ -0.05
TRAV8-4A0A0B4J246 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV8-4A0A0B4J246 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV8-4A0A0B4J246 AC087742.1-201ENST00000575880 1738 ntBASIC14.77□□□□□ -0.05
TRAV8-4A0A0B4J246 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TRAV8-4A0A0B4J246 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRAV8-4A0A0B4J246 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV8-4A0A0B4J246 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV8-4A0A0B4J246 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV8-4A0A0B4J246 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV8-4A0A0B4J246 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV8-4A0A0B4J246 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV8-4A0A0B4J246 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 SRR-208ENST00000576848 588 ntTSL 4 BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 AC133637.1-201ENST00000624115 1537 ntBASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-4A0A0B4J246 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 AC099791.2-201ENST00000605725 427 ntBASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 pRNA.6-201ENST00000610482 90 ntBASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 pRNA.5-201ENST00000612139 90 ntBASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 pRNA.11-201ENST00000618423 90 ntBASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 pRNA.13-201ENST00000619112 90 ntBASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 AC092053.2-201ENST00000640557 1818 ntBASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV8-4A0A0B4J246 BID-212ENST00000614949 1988 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 CA15P2-201ENST00000611168 834 ntBASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV8-4A0A0B4J246 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms