Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.06■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.06■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.06■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.05■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.05■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.05■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.05■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.05■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.05■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.05■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.05■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.05■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 RBM17P2-201ENST00000616397 1405 ntBASIC21.04■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.04■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.04■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.04■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.04■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.04■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.03■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.03■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.03■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.03■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.03■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.03■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 AC142381.4-202ENST00000563973 229 ntBASIC21.03■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 AC128676.1-201ENST00000454392 318 ntBASIC21.02■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.02■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.02■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.02■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 AC137767.1-201ENST00000602918 1920 ntBASIC21.02■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.02■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.01■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.01■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.01■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.01■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.01■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.01■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.01■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 KRT16P2-201ENST00000414673 1423 ntBASIC21.01■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.01■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 AL162412.1-201ENST00000567129 965 ntBASIC21■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.99■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.99■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.99■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.99■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.99■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.99■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.98■□□□□ 0.95
MSANTD3-TMEFF1A0A0A6YYJ0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms