Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 C1GALT1C1-201ENST00000304661 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 SUSD4-207ENST00000484758 2736 ntTSL 2 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 RPL10P2-201ENST00000310599 670 ntBASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 LUADT1-201ENST00000359838 453 ntTSL 5 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 MLIP-202ENST00000370876 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 PBDC1-202ENST00000373358 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 CSNK2B-204ENST00000375885 1061 ntTSL 5 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 AL121672.2-201ENST00000412643 867 ntTSL 3 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 TMEM91-204ENST00000413014 650 ntTSL 2 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 Metazoa_SRP.10-201ENST00000422908 238 ntBASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 AC067945.2-201ENST00000431351 623 ntTSL 5 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 ADH5P4-201ENST00000433151 1110 ntBASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 GSTM3P1-201ENST00000447621 574 ntBASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 RN7SL623P-201ENST00000494330 310 ntBASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 LINC01033-201ENST00000504609 735 ntTSL 5 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 ACTBP2-201ENST00000515712 1123 ntBASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 HNRNPA1P60-201ENST00000526810 951 ntBASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 AP003392.3-201ENST00000531886 667 ntTSL 5 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 HIF1A-AS1-201ENST00000557544 652 ntTSL 3 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 AC092769.1-201ENST00000561101 355 ntTSL 3 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 AC009065.2-202ENST00000563284 506 ntTSL 3 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 CMC2-223ENST00000570195 871 ntTSL 3 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 MIR4537-201ENST00000581717 70 ntBASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 AC011477.4-201ENST00000590274 609 ntTSL 3 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 AC020765.2-201ENST00000613454 432 ntBASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 RHOXF2-201ENST00000371388 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 CBL-203ENST00000634586 3457 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 NEK10-204ENST00000383771 2023 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 ARHGEF10-203ENST00000398560 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 RBFOX1-208ENST00000547372 3524 ntTSL 5 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 AC007608.3-201ENST00000570167 5214 ntTSL 2 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 CDH2-201ENST00000269141 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 IL7-201ENST00000263851 2076 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 AZI2-212ENST00000479665 4706 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 CCDC112-206ENST00000512261 2279 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 AC005224.1-201ENST00000458492 1537 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 ZNF493-204ENST00000594390 1536 ntTSL 2 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 AMBRA1-202ENST00000458649 5351 ntTSL 2 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 ADGRE5-202ENST00000357355 3054 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 TARS2-204ENST00000369064 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 AL136295.1-201ENST00000530611 2740 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 NBR1-202ENST00000542611 2703 ntTSL 2 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 PRG2-204ENST00000533605 1350 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 METTL15-203ENST00000406787 4304 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 LIPG-202ENST00000427224 1760 ntTSL 2 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 METTL2B-201ENST00000262432 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 LINGO4-201ENST00000368820 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 DNAH2-203ENST00000572933 14955 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 NWD1-205ENST00000549814 6614 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 PTCH2-201ENST00000372192 4225 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 AGK-201ENST00000355413 3849 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 CPT1B-207ENST00000457250 2217 ntTSL 5 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 MARCH8-202ENST00000395769 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 GDI2-202ENST00000380181 1408 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 ZKSCAN1-206ENST00000620510 9192 ntTSL 5 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 AC106788.1-201ENST00000550753 2661 ntTSL 2 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 PRR5L-201ENST00000378867 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 METTL22-202ENST00000381920 4984 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 DLAT-202ENST00000393051 3517 ntTSL 5 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 FAM13C-202ENST00000435852 2088 ntTSL 2 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 KRT7-AS-201ENST00000546686 1693 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 ANKS1B-210ENST00000547446 1690 ntTSL 2 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 LINC02002-201ENST00000578977 1481 ntTSL 2 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 CDCA8-201ENST00000327331 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 ITSN1-211ENST00000399355 4003 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 CCDC18-201ENST00000343253 4867 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 SPATA32-201ENST00000331780 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 OR2T1-201ENST00000366474 1110 ntBASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 ADAM2-203ENST00000379853 2125 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 IGLV7-46-201ENST00000390295 385 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 MORN2-205ENST00000410014 750 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 LATS2-AS1-201ENST00000422510 632 ntTSL 5 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 AC092807.1-201ENST00000426794 255 ntTSL 3 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 MAGI2-AS3-205ENST00000429408 634 ntTSL 3 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 AL139220.1-201ENST00000436802 520 ntBASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 SOCS2P2-201ENST00000458366 574 ntBASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 SSR3-202ENST00000463503 596 ntTSL 4 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 RN7SL658P-201ENST00000463595 303 ntBASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 RN7SL317P-201ENST00000497408 329 ntBASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 AC004590.1-201ENST00000502435 510 ntTSL 2 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 AC112722.1-201ENST00000514884 587 ntTSL 4 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 SCARNA16.1-201ENST00000516133 183 ntBASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 SNORA50B-201ENST00000517198 135 ntBASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 AC022639.1-203ENST00000521958 579 ntTSL 4 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 CTSC-206ENST00000529974 747 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 MAJIN-204ENST00000530444 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 GGTA2P-201ENST00000543442 1125 ntBASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 APOC4-APOC2-202ENST00000589057 680 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 AC022098.4-201ENST00000622575 352 ntBASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 AC024580.2-201ENST00000623363 231 ntBASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 DDX41-218ENST00000625286 150 ntTSL 5 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 SNORA50B-202ENST00000630737 137 ntBASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 GOSR2-242ENST00000640711 1083 ntTSL 5 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 DMXL2-201ENST00000251076 10672 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 583.7 ms