Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ITGA7-213ENST00000555728 3930 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 ST7L-203ENST00000360743 4206 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 FER1L6-AS1-201ENST00000518567 2315 ntTSL 2 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 ZNF571-206ENST00000593133 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 PYHIN1-201ENST00000368135 1662 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 LINC01446-201ENST00000380970 3484 ntTSL 2 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 AL512791.2-201ENST00000615251 4609 ntBASIC11.94□□□□□ -0.5
LMO3Q8TAP4 RASGRP4-204ENST00000454404 3116 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 LIPC-AS1-201ENST00000561083 2231 ntTSL 2 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 LINC01588-203ENST00000529902 4279 ntTSL 2 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 AC011337.1-201ENST00000606930 3317 ntBASIC11.94□□□□□ -0.5
LMO3Q8TAP4 PFKFB3-205ENST00000379789 4157 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 SNX15-201ENST00000352068 771 ntTSL 5 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 S100A4-202ENST00000368714 531 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 UBD-203ENST00000377050 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 KRT18P50-201ENST00000404337 1243 ntBASIC11.94□□□□□ -0.5
LMO3Q8TAP4 CCDC103-203ENST00000410027 571 ntTSL 4 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 AL355994.4-201ENST00000416882 563 ntBASIC11.94□□□□□ -0.5
LMO3Q8TAP4 AL353807.2-201ENST00000456382 220 ntTSL 5 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 MIR2110-201ENST00000459421 75 ntBASIC11.94□□□□□ -0.5
LMO3Q8TAP4 TMX2-CTNND1-201ENST00000528395 585 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 LINC00648-204ENST00000557749 443 ntTSL 5 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 TMPOP2-201ENST00000575258 1201 ntBASIC11.94□□□□□ -0.5
LMO3Q8TAP4 AC079779.3-227ENST00000591927 860 ntTSL 5 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 AC016885.3-201ENST00000598428 258 ntBASIC11.94□□□□□ -0.5
LMO3Q8TAP4 AL157392.3-218ENST00000600249 773 ntTSL 5 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 AC008761.2-201ENST00000600512 419 ntTSL 5 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 GAPDHP72-202ENST00000636791 2141 ntTSL 5 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 SLIT2-202ENST00000503823 5233 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 CYP11B1-201ENST00000292427 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 POLDIP3-205ENST00000451060 3491 ntTSL 2 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 CASP3-202ENST00000393585 2624 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 AGGF1-201ENST00000312916 4509 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 TBC1D16-202ENST00000340848 4244 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 SLC7A6OS-201ENST00000263997 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 PCDH18-204ENST00000510305 1483 ntTSL 2 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 TUBGCP2-201ENST00000252936 3885 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 TRIM59-201ENST00000309784 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 HACL1-209ENST00000457447 1721 ntTSL 2 BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 AC015920.1-201ENST00000624645 2450 ntBASIC11.94□□□□□ -0.5
LMO3Q8TAP4 CUL7-201ENST00000265348 5254 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LMO3Q8TAP4 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 ANXA11-205ENST00000438331 6965 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 ARMC2-202ENST00000368972 3663 ntTSL 2 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 GPALPP1-203ENST00000379151 1393 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 NMD3-206ENST00000472947 2378 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 MERTK-207ENST00000616902 3104 ntTSL 5 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 SFI1-203ENST00000400288 4002 ntAPPRIS P4 TSL 2 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 AC104794.2-201ENST00000567540 1572 ntBASIC11.93□□□□□ -0.5
LMO3Q8TAP4 ARMC1-201ENST00000276569 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 C13orf42-202ENST00000563710 3010 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 XRRA1-201ENST00000321448 4695 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 AC005481.1-201ENST00000409610 3456 ntTSL 4 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 C14orf119-201ENST00000319074 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 AC104461.1-202ENST00000634596 1768 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 AC073320.1-201ENST00000587038 1511 ntTSL 5 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 GLE1-202ENST00000372770 2218 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 TCF12-204ENST00000438423 4786 ntAPPRIS P4 TSL 5 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 LINC00619-201ENST00000374432 1121 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 KRTAP19-1-201ENST00000390689 646 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 MRAP-203ENST00000399784 1000 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 GHRL-203ENST00000422159 401 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 ASS1P7-201ENST00000423174 1226 ntBASIC11.93□□□□□ -0.5
LMO3Q8TAP4 CEACAM22P-202ENST00000455058 1021 ntBASIC11.93□□□□□ -0.5
LMO3Q8TAP4 SOCS2P2-201ENST00000458366 574 ntBASIC11.93□□□□□ -0.5
LMO3Q8TAP4 TPI1P2-201ENST00000491343 752 ntBASIC11.93□□□□□ -0.5
LMO3Q8TAP4 SLC10A7-205ENST00000507030 1134 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 AC008592.3-201ENST00000514941 418 ntBASIC11.93□□□□□ -0.5
LMO3Q8TAP4 NAV2-AS4-201ENST00000532874 1181 ntTSL 5 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 AC074032.1-201ENST00000548468 698 ntTSL 3 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 SERPINA2-201ENST00000553483 931 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 TBC1D21-203ENST00000562056 965 ntTSL 5 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 AC009035.1-201ENST00000562900 717 ntTSL 3 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 LINC01570-202ENST00000566218 732 ntTSL 2 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 RN7SL624P-201ENST00000580297 278 ntBASIC11.93□□□□□ -0.5
LMO3Q8TAP4 PDLIM1P1-201ENST00000604187 969 ntBASIC11.93□□□□□ -0.5
LMO3Q8TAP4 Metazoa_SRP.196-201ENST00000613380 301 ntBASIC11.93□□□□□ -0.5
LMO3Q8TAP4 AL137798.2-201ENST00000633763 817 ntTSL 3 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 AC022167.5-203ENST00000637929 398 ntTSL 5 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 TNNT3-217ENST00000641225 877 ntBASIC11.93□□□□□ -0.5
LMO3Q8TAP4 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 MYO10-212ENST00000515803 4839 ntTSL 2 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 AKT1-202ENST00000402615 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 ZBTB3-201ENST00000394807 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 MYO7A-203ENST00000409893 4050 ntTSL 5 BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 LZIC-202ENST00000377223 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 CEPT1-210ENST00000545121 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LMO3Q8TAP4 SIRT5-204ENST00000397350 4382 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms