Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ARFGEF1Q9Y6D6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
ARFGEF1Q9Y6D6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
ARFGEF1Q9Y6D6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ARFGEF1Q9Y6D6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.33■■□□□ 1.81
ARFGEF1Q9Y6D6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC26.33■■□□□ 1.81
ARFGEF1Q9Y6D6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC26.33■■□□□ 1.81
ARFGEF1Q9Y6D6 AP006587.3-201ENST00000525742 1516 ntBASIC26.33■■□□□ 1.81
ARFGEF1Q9Y6D6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ARFGEF1Q9Y6D6 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.33■■□□□ 1.81
ARFGEF1Q9Y6D6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.33■■□□□ 1.81
ARFGEF1Q9Y6D6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ARFGEF1Q9Y6D6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.33■■□□□ 1.8
ARFGEF1Q9Y6D6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ARFGEF1Q9Y6D6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
ARFGEF1Q9Y6D6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
ARFGEF1Q9Y6D6 OR2A1-AS1-201ENST00000462305 773 ntBASIC26.32■■□□□ 1.8
ARFGEF1Q9Y6D6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC26.32■■□□□ 1.8
ARFGEF1Q9Y6D6 AC053503.5-201ENST00000601508 636 ntBASIC26.32■■□□□ 1.8
ARFGEF1Q9Y6D6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ARFGEF1Q9Y6D6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
ARFGEF1Q9Y6D6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.32■■□□□ 1.8
ARFGEF1Q9Y6D6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ARFGEF1Q9Y6D6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ARFGEF1Q9Y6D6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ARFGEF1Q9Y6D6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ARFGEF1Q9Y6D6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
ARFGEF1Q9Y6D6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ARFGEF1Q9Y6D6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC26.32■■□□□ 1.8
ARFGEF1Q9Y6D6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC26.32■■□□□ 1.8
ARFGEF1Q9Y6D6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ARFGEF1Q9Y6D6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ARFGEF1Q9Y6D6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ARFGEF1Q9Y6D6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.31■■□□□ 1.8
ARFGEF1Q9Y6D6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ARFGEF1Q9Y6D6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ARFGEF1Q9Y6D6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ARFGEF1Q9Y6D6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC26.31■■□□□ 1.8
ARFGEF1Q9Y6D6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC26.31■■□□□ 1.8
ARFGEF1Q9Y6D6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC26.31■■□□□ 1.8
ARFGEF1Q9Y6D6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC26.31■■□□□ 1.8
ARFGEF1Q9Y6D6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ARFGEF1Q9Y6D6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ARFGEF1Q9Y6D6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
ARFGEF1Q9Y6D6 RBM17P2-201ENST00000616397 1405 ntBASIC26.3■■□□□ 1.8
ARFGEF1Q9Y6D6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC26.3■■□□□ 1.8
ARFGEF1Q9Y6D6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ARFGEF1Q9Y6D6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ARFGEF1Q9Y6D6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
ARFGEF1Q9Y6D6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ARFGEF1Q9Y6D6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ARFGEF1Q9Y6D6 RPPH1-201ENST00000516869 333 ntBASIC26.3■■□□□ 1.8
ARFGEF1Q9Y6D6 C1QBPP2-201ENST00000528754 825 ntBASIC26.3■■□□□ 1.8
ARFGEF1Q9Y6D6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
ARFGEF1Q9Y6D6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.29■■□□□ 1.8
ARFGEF1Q9Y6D6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.29■■□□□ 1.8
ARFGEF1Q9Y6D6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.29■■□□□ 1.8
ARFGEF1Q9Y6D6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC26.29■■□□□ 1.8
ARFGEF1Q9Y6D6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC26.29■■□□□ 1.8
ARFGEF1Q9Y6D6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ARFGEF1Q9Y6D6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.29■■□□□ 1.8
ARFGEF1Q9Y6D6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ARFGEF1Q9Y6D6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
ARFGEF1Q9Y6D6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC26.28■■□□□ 1.8
ARFGEF1Q9Y6D6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ARFGEF1Q9Y6D6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC26.28■■□□□ 1.8
ARFGEF1Q9Y6D6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
ARFGEF1Q9Y6D6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
ARFGEF1Q9Y6D6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.28■■□□□ 1.8
ARFGEF1Q9Y6D6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC26.28■■□□□ 1.8
ARFGEF1Q9Y6D6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ARFGEF1Q9Y6D6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC26.28■■□□□ 1.8
ARFGEF1Q9Y6D6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC26.28■■□□□ 1.8
ARFGEF1Q9Y6D6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ARFGEF1Q9Y6D6 SNORA78-201ENST00000459373 127 ntBASIC26.28■■□□□ 1.8
ARFGEF1Q9Y6D6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC26.28■■□□□ 1.8
ARFGEF1Q9Y6D6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
ARFGEF1Q9Y6D6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC26.28■■□□□ 1.8
ARFGEF1Q9Y6D6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ARFGEF1Q9Y6D6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ARFGEF1Q9Y6D6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ARFGEF1Q9Y6D6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
ARFGEF1Q9Y6D6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC26.27■■□□□ 1.8
ARFGEF1Q9Y6D6 AC012618.2-201ENST00000428058 849 ntBASIC26.27■■□□□ 1.8
ARFGEF1Q9Y6D6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ARFGEF1Q9Y6D6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ARFGEF1Q9Y6D6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ARFGEF1Q9Y6D6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.26■■□□□ 1.79
ARFGEF1Q9Y6D6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ARFGEF1Q9Y6D6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ARFGEF1Q9Y6D6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC26.26■■□□□ 1.79
ARFGEF1Q9Y6D6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
ARFGEF1Q9Y6D6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
ARFGEF1Q9Y6D6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC26.26■■□□□ 1.79
ARFGEF1Q9Y6D6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.26■■□□□ 1.79
ARFGEF1Q9Y6D6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC26.25■■□□□ 1.79
ARFGEF1Q9Y6D6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
ARFGEF1Q9Y6D6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ARFGEF1Q9Y6D6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC26.25■■□□□ 1.79
ARFGEF1Q9Y6D6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms