Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHGA9Q9Y5G4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA9Q9Y5G4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHGA9Q9Y5G4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PCDHGA9Q9Y5G4 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHGA9Q9Y5G4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA9Q9Y5G4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PCDHGA9Q9Y5G4 AC092068.2-201ENST00000590491 1708 ntBASIC19.88■□□□□ 0.77
PCDHGA9Q9Y5G4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA9Q9Y5G4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHGA9Q9Y5G4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
PCDHGA9Q9Y5G4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA9Q9Y5G4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA9Q9Y5G4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA9Q9Y5G4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA9Q9Y5G4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA9Q9Y5G4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA9Q9Y5G4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDHGA9Q9Y5G4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA9Q9Y5G4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDHGA9Q9Y5G4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.87■□□□□ 0.77
PCDHGA9Q9Y5G4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDHGA9Q9Y5G4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA9Q9Y5G4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PCDHGA9Q9Y5G4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA9Q9Y5G4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA9Q9Y5G4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHGA9Q9Y5G4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.87■□□□□ 0.77
PCDHGA9Q9Y5G4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA9Q9Y5G4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.86■□□□□ 0.77
PCDHGA9Q9Y5G4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA9Q9Y5G4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA9Q9Y5G4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA9Q9Y5G4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
PCDHGA9Q9Y5G4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA9Q9Y5G4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.86■□□□□ 0.77
PCDHGA9Q9Y5G4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHGA9Q9Y5G4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHGA9Q9Y5G4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHGA9Q9Y5G4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PCDHGA9Q9Y5G4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.86■□□□□ 0.77
PCDHGA9Q9Y5G4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHGA9Q9Y5G4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHGA9Q9Y5G4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PCDHGA9Q9Y5G4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA9Q9Y5G4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
PCDHGA9Q9Y5G4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA9Q9Y5G4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PCDHGA9Q9Y5G4 KRT18P20-201ENST00000548986 1279 ntBASIC19.85■□□□□ 0.77
PCDHGA9Q9Y5G4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHGA9Q9Y5G4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDHGA9Q9Y5G4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PCDHGA9Q9Y5G4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA9Q9Y5G4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHGA9Q9Y5G4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA9Q9Y5G4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA9Q9Y5G4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA9Q9Y5G4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA9Q9Y5G4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA9Q9Y5G4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA9Q9Y5G4 GUSBP5-202ENST00000510805 1989 ntBASIC19.84■□□□□ 0.77
PCDHGA9Q9Y5G4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
PCDHGA9Q9Y5G4 AC055733.4-201ENST00000638462 1354 ntBASIC19.84■□□□□ 0.77
PCDHGA9Q9Y5G4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PCDHGA9Q9Y5G4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA9Q9Y5G4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PCDHGA9Q9Y5G4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
PCDHGA9Q9Y5G4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA9Q9Y5G4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHGA9Q9Y5G4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHGA9Q9Y5G4 AC073210.2-201ENST00000430369 194 ntBASIC19.84■□□□□ 0.77
PCDHGA9Q9Y5G4 TSPY20P-201ENST00000450910 630 ntBASIC19.84■□□□□ 0.77
PCDHGA9Q9Y5G4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHGA9Q9Y5G4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA9Q9Y5G4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA9Q9Y5G4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA9Q9Y5G4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA9Q9Y5G4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGA9Q9Y5G4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.83■□□□□ 0.77
PCDHGA9Q9Y5G4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PCDHGA9Q9Y5G4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGA9Q9Y5G4 AC127496.7-201ENST00000625110 1798 ntBASIC19.83■□□□□ 0.77
PCDHGA9Q9Y5G4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGA9Q9Y5G4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PCDHGA9Q9Y5G4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGA9Q9Y5G4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.83■□□□□ 0.77
PCDHGA9Q9Y5G4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PCDHGA9Q9Y5G4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PCDHGA9Q9Y5G4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHGA9Q9Y5G4 AC133552.2-202ENST00000575694 574 ntBASIC19.83■□□□□ 0.77
PCDHGA9Q9Y5G4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
PCDHGA9Q9Y5G4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHGA9Q9Y5G4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
PCDHGA9Q9Y5G4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHGA9Q9Y5G4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
PCDHGA9Q9Y5G4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA9Q9Y5G4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
PCDHGA9Q9Y5G4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA9Q9Y5G4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA9Q9Y5G4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms