Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM4Q9Y4Z0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.97■□□□□ 0.31
LSM4Q9Y4Z0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.96■□□□□ 0.31
LSM4Q9Y4Z0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LSM4Q9Y4Z0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.96■□□□□ 0.31
LSM4Q9Y4Z0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LSM4Q9Y4Z0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LSM4Q9Y4Z0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.96■□□□□ 0.31
LSM4Q9Y4Z0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LSM4Q9Y4Z0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.96■□□□□ 0.31
LSM4Q9Y4Z0 IRS3P-201ENST00000223076 1006 ntBASIC16.96■□□□□ 0.31
LSM4Q9Y4Z0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LSM4Q9Y4Z0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.96■□□□□ 0.31
LSM4Q9Y4Z0 AL162430.1-201ENST00000480705 870 ntBASIC16.96■□□□□ 0.31
LSM4Q9Y4Z0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.96■□□□□ 0.31
LSM4Q9Y4Z0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.96■□□□□ 0.31
LSM4Q9Y4Z0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
LSM4Q9Y4Z0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.96■□□□□ 0.31
LSM4Q9Y4Z0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LSM4Q9Y4Z0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LSM4Q9Y4Z0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
LSM4Q9Y4Z0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.96■□□□□ 0.3
LSM4Q9Y4Z0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
LSM4Q9Y4Z0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.96■□□□□ 0.3
LSM4Q9Y4Z0 C17orf82-201ENST00000623772 1530 ntBASIC16.96■□□□□ 0.3
LSM4Q9Y4Z0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.95■□□□□ 0.3
LSM4Q9Y4Z0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSM4Q9Y4Z0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
LSM4Q9Y4Z0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LSM4Q9Y4Z0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSM4Q9Y4Z0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.95■□□□□ 0.3
LSM4Q9Y4Z0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSM4Q9Y4Z0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSM4Q9Y4Z0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
LSM4Q9Y4Z0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LSM4Q9Y4Z0 AC008764.7-201ENST00000593779 1081 ntBASIC16.95■□□□□ 0.3
LSM4Q9Y4Z0 AL499627.2-201ENST00000606283 725 ntBASIC16.95■□□□□ 0.3
LSM4Q9Y4Z0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LSM4Q9Y4Z0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSM4Q9Y4Z0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSM4Q9Y4Z0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LSM4Q9Y4Z0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LSM4Q9Y4Z0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LSM4Q9Y4Z0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LSM4Q9Y4Z0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LSM4Q9Y4Z0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LSM4Q9Y4Z0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LSM4Q9Y4Z0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.94■□□□□ 0.3
LSM4Q9Y4Z0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.94■□□□□ 0.3
LSM4Q9Y4Z0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.94■□□□□ 0.3
LSM4Q9Y4Z0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LSM4Q9Y4Z0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LSM4Q9Y4Z0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LSM4Q9Y4Z0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
LSM4Q9Y4Z0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSM4Q9Y4Z0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSM4Q9Y4Z0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSM4Q9Y4Z0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSM4Q9Y4Z0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LSM4Q9Y4Z0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSM4Q9Y4Z0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSM4Q9Y4Z0 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.93■□□□□ 0.3
LSM4Q9Y4Z0 AC099791.1-201ENST00000416440 715 ntBASIC16.93■□□□□ 0.3
LSM4Q9Y4Z0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.93■□□□□ 0.3
LSM4Q9Y4Z0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.93■□□□□ 0.3
LSM4Q9Y4Z0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.93■□□□□ 0.3
LSM4Q9Y4Z0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSM4Q9Y4Z0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSM4Q9Y4Z0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSM4Q9Y4Z0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LSM4Q9Y4Z0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSM4Q9Y4Z0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LSM4Q9Y4Z0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSM4Q9Y4Z0 LINC01521-201ENST00000504184 1943 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms