Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF11Q9Y3C5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF11Q9Y3C5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF11Q9Y3C5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF11Q9Y3C5 AP004607.7-201ENST00000527152 1677 ntBASIC20.71■□□□□ 0.91
RNF11Q9Y3C5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF11Q9Y3C5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF11Q9Y3C5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF11Q9Y3C5 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF11Q9Y3C5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF11Q9Y3C5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF11Q9Y3C5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF11Q9Y3C5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
RNF11Q9Y3C5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RNF11Q9Y3C5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF11Q9Y3C5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RNF11Q9Y3C5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RNF11Q9Y3C5 AC005229.4-201ENST00000610085 2198 ntBASIC20.7■□□□□ 0.91
RNF11Q9Y3C5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF11Q9Y3C5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF11Q9Y3C5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF11Q9Y3C5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF11Q9Y3C5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF11Q9Y3C5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RNF11Q9Y3C5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF11Q9Y3C5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF11Q9Y3C5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF11Q9Y3C5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.7■□□□□ 0.9
RNF11Q9Y3C5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF11Q9Y3C5 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF11Q9Y3C5 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF11Q9Y3C5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RNF11Q9Y3C5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF11Q9Y3C5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF11Q9Y3C5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF11Q9Y3C5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF11Q9Y3C5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF11Q9Y3C5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF11Q9Y3C5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF11Q9Y3C5 Z98882.1-201ENST00000622160 2253 ntBASIC20.69■□□□□ 0.9
RNF11Q9Y3C5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF11Q9Y3C5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF11Q9Y3C5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
RNF11Q9Y3C5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF11Q9Y3C5 AC133561.4-201ENST00000566112 224 ntBASIC20.69■□□□□ 0.9
RNF11Q9Y3C5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF11Q9Y3C5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF11Q9Y3C5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF11Q9Y3C5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF11Q9Y3C5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF11Q9Y3C5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF11Q9Y3C5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF11Q9Y3C5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 PBX2P1-201ENST00000493219 1291 ntBASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 AC126544.1-201ENST00000580842 1059 ntBASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 AC008764.7-201ENST00000593779 1081 ntBASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF11Q9Y3C5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF11Q9Y3C5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF11Q9Y3C5 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
RNF11Q9Y3C5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF11Q9Y3C5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RNF11Q9Y3C5 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF11Q9Y3C5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF11Q9Y3C5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF11Q9Y3C5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RNF11Q9Y3C5 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RNF11Q9Y3C5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF11Q9Y3C5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.67■□□□□ 0.9
RNF11Q9Y3C5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF11Q9Y3C5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF11Q9Y3C5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF11Q9Y3C5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 AL034346.1-201ENST00000568244 1277 ntBASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms