Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.35■□□□□ 0.37
RCL1Q9Y2P8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RCL1Q9Y2P8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RCL1Q9Y2P8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RCL1Q9Y2P8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RCL1Q9Y2P8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RCL1Q9Y2P8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RCL1Q9Y2P8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RCL1Q9Y2P8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RCL1Q9Y2P8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RCL1Q9Y2P8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.34■□□□□ 0.37
RCL1Q9Y2P8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.34■□□□□ 0.37
RCL1Q9Y2P8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.34■□□□□ 0.37
RCL1Q9Y2P8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.34■□□□□ 0.37
RCL1Q9Y2P8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RCL1Q9Y2P8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RCL1Q9Y2P8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RCL1Q9Y2P8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.34■□□□□ 0.37
RCL1Q9Y2P8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RCL1Q9Y2P8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RCL1Q9Y2P8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RCL1Q9Y2P8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RCL1Q9Y2P8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.37
RCL1Q9Y2P8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RCL1Q9Y2P8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.33■□□□□ 0.37
RCL1Q9Y2P8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.33■□□□□ 0.37
RCL1Q9Y2P8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RCL1Q9Y2P8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.37
RCL1Q9Y2P8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RCL1Q9Y2P8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RCL1Q9Y2P8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RCL1Q9Y2P8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RCL1Q9Y2P8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RCL1Q9Y2P8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.33■□□□□ 0.36
RCL1Q9Y2P8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.33■□□□□ 0.36
RCL1Q9Y2P8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RCL1Q9Y2P8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RCL1Q9Y2P8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RCL1Q9Y2P8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCL1Q9Y2P8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCL1Q9Y2P8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RCL1Q9Y2P8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.32■□□□□ 0.36
RCL1Q9Y2P8 C17orf82-201ENST00000623772 1530 ntBASIC17.32■□□□□ 0.36
RCL1Q9Y2P8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
RCL1Q9Y2P8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
RCL1Q9Y2P8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RCL1Q9Y2P8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCL1Q9Y2P8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCL1Q9Y2P8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.32■□□□□ 0.36
RCL1Q9Y2P8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.32■□□□□ 0.36
RCL1Q9Y2P8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.32■□□□□ 0.36
RCL1Q9Y2P8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCL1Q9Y2P8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RCL1Q9Y2P8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.32■□□□□ 0.36
RCL1Q9Y2P8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RCL1Q9Y2P8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.32■□□□□ 0.36
RCL1Q9Y2P8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RCL1Q9Y2P8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RCL1Q9Y2P8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCL1Q9Y2P8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.31■□□□□ 0.36
RCL1Q9Y2P8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RCL1Q9Y2P8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCL1Q9Y2P8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCL1Q9Y2P8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RCL1Q9Y2P8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RCL1Q9Y2P8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCL1Q9Y2P8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCL1Q9Y2P8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.31■□□□□ 0.36
RCL1Q9Y2P8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.31■□□□□ 0.36
RCL1Q9Y2P8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCL1Q9Y2P8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCL1Q9Y2P8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RCL1Q9Y2P8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCL1Q9Y2P8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.31■□□□□ 0.36
RCL1Q9Y2P8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCL1Q9Y2P8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RCL1Q9Y2P8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.31■□□□□ 0.36
RCL1Q9Y2P8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCL1Q9Y2P8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.3■□□□□ 0.36
RCL1Q9Y2P8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCL1Q9Y2P8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCL1Q9Y2P8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.3■□□□□ 0.36
RCL1Q9Y2P8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms