Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RPH3AQ9Y2J0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.45■□□□□ 0.7
RPH3AQ9Y2J0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RPH3AQ9Y2J0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 ID1-201ENST00000376105 1233 ntBASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPH3AQ9Y2J0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 PKD1P6-201ENST00000343738 4769 ntBASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPH3AQ9Y2J0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPH3AQ9Y2J0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPH3AQ9Y2J0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPH3AQ9Y2J0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RPH3AQ9Y2J0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPH3AQ9Y2J0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPH3AQ9Y2J0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
RPH3AQ9Y2J0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPH3AQ9Y2J0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.42■□□□□ 0.7
RPH3AQ9Y2J0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.42■□□□□ 0.7
RPH3AQ9Y2J0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPH3AQ9Y2J0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPH3AQ9Y2J0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPH3AQ9Y2J0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPH3AQ9Y2J0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPH3AQ9Y2J0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPH3AQ9Y2J0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPH3AQ9Y2J0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 KRT18P5-201ENST00000436075 1291 ntBASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 AC079140.4-201ENST00000507448 529 ntBASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 NTF6G-201ENST00000591094 616 ntBASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 AC092437.1-201ENST00000624794 1048 ntBASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.41■□□□□ 0.7
RPH3AQ9Y2J0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPH3AQ9Y2J0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPH3AQ9Y2J0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.4■□□□□ 0.7
RPH3AQ9Y2J0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.4■□□□□ 0.7
RPH3AQ9Y2J0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPH3AQ9Y2J0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPH3AQ9Y2J0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RPH3AQ9Y2J0 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.4■□□□□ 0.7
RPH3AQ9Y2J0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
RPH3AQ9Y2J0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RPH3AQ9Y2J0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms