Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPHK1Q9NYA1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPHK1Q9NYA1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPHK1Q9NYA1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPHK1Q9NYA1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.54■□□□□ 0.88
SPHK1Q9NYA1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.54■□□□□ 0.88
SPHK1Q9NYA1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPHK1Q9NYA1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.54■□□□□ 0.88
SPHK1Q9NYA1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPHK1Q9NYA1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPHK1Q9NYA1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPHK1Q9NYA1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPHK1Q9NYA1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPHK1Q9NYA1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SPHK1Q9NYA1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPHK1Q9NYA1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.53■□□□□ 0.88
SPHK1Q9NYA1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.53■□□□□ 0.88
SPHK1Q9NYA1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.53■□□□□ 0.88
SPHK1Q9NYA1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.53■□□□□ 0.88
SPHK1Q9NYA1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
SPHK1Q9NYA1 AC092437.1-201ENST00000624794 1048 ntBASIC20.53■□□□□ 0.88
SPHK1Q9NYA1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SPHK1Q9NYA1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.53■□□□□ 0.88
SPHK1Q9NYA1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPHK1Q9NYA1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPHK1Q9NYA1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPHK1Q9NYA1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPHK1Q9NYA1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPHK1Q9NYA1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPHK1Q9NYA1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPHK1Q9NYA1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPHK1Q9NYA1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SPHK1Q9NYA1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SPHK1Q9NYA1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SPHK1Q9NYA1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPHK1Q9NYA1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.52■□□□□ 0.88
SPHK1Q9NYA1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPHK1Q9NYA1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPHK1Q9NYA1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.52■□□□□ 0.88
SPHK1Q9NYA1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SPHK1Q9NYA1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SPHK1Q9NYA1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SPHK1Q9NYA1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SPHK1Q9NYA1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.51■□□□□ 0.87
SPHK1Q9NYA1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPHK1Q9NYA1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
SPHK1Q9NYA1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPHK1Q9NYA1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
SPHK1Q9NYA1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.51■□□□□ 0.87
SPHK1Q9NYA1 KRT19P1-201ENST00000405746 1186 ntBASIC20.51■□□□□ 0.87
SPHK1Q9NYA1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.51■□□□□ 0.87
SPHK1Q9NYA1 EEF1DP3-203ENST00000566025 782 ntBASIC20.51■□□□□ 0.87
SPHK1Q9NYA1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.51■□□□□ 0.87
SPHK1Q9NYA1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.51■□□□□ 0.87
SPHK1Q9NYA1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPHK1Q9NYA1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPHK1Q9NYA1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SPHK1Q9NYA1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPHK1Q9NYA1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.51■□□□□ 0.87
SPHK1Q9NYA1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.51■□□□□ 0.87
SPHK1Q9NYA1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPHK1Q9NYA1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.51■□□□□ 0.87
SPHK1Q9NYA1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.51■□□□□ 0.87
SPHK1Q9NYA1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPHK1Q9NYA1 C11orf96-202ENST00000528572 1834 ntBASIC20.5■□□□□ 0.87
SPHK1Q9NYA1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.5■□□□□ 0.87
SPHK1Q9NYA1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPHK1Q9NYA1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SPHK1Q9NYA1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPHK1Q9NYA1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.5■□□□□ 0.87
SPHK1Q9NYA1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.5■□□□□ 0.87
SPHK1Q9NYA1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.5■□□□□ 0.87
SPHK1Q9NYA1 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.5■□□□□ 0.87
SPHK1Q9NYA1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.5■□□□□ 0.87
SPHK1Q9NYA1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPHK1Q9NYA1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPHK1Q9NYA1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPHK1Q9NYA1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPHK1Q9NYA1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPHK1Q9NYA1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPHK1Q9NYA1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SPHK1Q9NYA1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.49■□□□□ 0.87
SPHK1Q9NYA1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.49■□□□□ 0.87
SPHK1Q9NYA1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPHK1Q9NYA1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.49■□□□□ 0.87
SPHK1Q9NYA1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.49■□□□□ 0.87
SPHK1Q9NYA1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.49■□□□□ 0.87
SPHK1Q9NYA1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPHK1Q9NYA1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPHK1Q9NYA1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPHK1Q9NYA1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPHK1Q9NYA1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPHK1Q9NYA1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SPHK1Q9NYA1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPHK1Q9NYA1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPHK1Q9NYA1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPHK1Q9NYA1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
SPHK1Q9NYA1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.48■□□□□ 0.87
SPHK1Q9NYA1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPHK1Q9NYA1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms