Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SLC52A1Q9NWF4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC30.83■■■□□ 2.53
SLC52A1Q9NWF4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC30.82■■■□□ 2.52
SLC52A1Q9NWF4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SLC52A1Q9NWF4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
SLC52A1Q9NWF4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SLC52A1Q9NWF4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
SLC52A1Q9NWF4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC30.82■■■□□ 2.52
SLC52A1Q9NWF4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
SLC52A1Q9NWF4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC30.82■■■□□ 2.52
SLC52A1Q9NWF4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC30.82■■■□□ 2.52
SLC52A1Q9NWF4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC30.82■■■□□ 2.52
SLC52A1Q9NWF4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
SLC52A1Q9NWF4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC30.81■■■□□ 2.52
SLC52A1Q9NWF4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC30.81■■■□□ 2.52
SLC52A1Q9NWF4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
SLC52A1Q9NWF4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SLC52A1Q9NWF4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SLC52A1Q9NWF4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SLC52A1Q9NWF4 AP006294.2-201ENST00000641667 209 ntBASIC30.81■■■□□ 2.52
SLC52A1Q9NWF4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC30.81■■■□□ 2.52
SLC52A1Q9NWF4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
SLC52A1Q9NWF4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
SLC52A1Q9NWF4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC30.8■■■□□ 2.52
SLC52A1Q9NWF4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SLC52A1Q9NWF4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
SLC52A1Q9NWF4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC30.8■■■□□ 2.52
SLC52A1Q9NWF4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC30.8■■■□□ 2.52
SLC52A1Q9NWF4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC30.8■■■□□ 2.52
SLC52A1Q9NWF4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC30.8■■■□□ 2.52
SLC52A1Q9NWF4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SLC52A1Q9NWF4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SLC52A1Q9NWF4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SLC52A1Q9NWF4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
SLC52A1Q9NWF4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SLC52A1Q9NWF4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC30.79■■■□□ 2.52
SLC52A1Q9NWF4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC30.79■■■□□ 2.52
SLC52A1Q9NWF4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SLC52A1Q9NWF4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC30.79■■■□□ 2.52
SLC52A1Q9NWF4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SLC52A1Q9NWF4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC30.79■■■□□ 2.52
SLC52A1Q9NWF4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC30.79■■■□□ 2.52
SLC52A1Q9NWF4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC30.79■■■□□ 2.52
SLC52A1Q9NWF4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SLC52A1Q9NWF4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
SLC52A1Q9NWF4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
SLC52A1Q9NWF4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SLC52A1Q9NWF4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC30.78■■■□□ 2.52
SLC52A1Q9NWF4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC30.78■■■□□ 2.52
SLC52A1Q9NWF4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SLC52A1Q9NWF4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC30.78■■■□□ 2.52
SLC52A1Q9NWF4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC30.78■■■□□ 2.52
SLC52A1Q9NWF4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
SLC52A1Q9NWF4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
SLC52A1Q9NWF4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
SLC52A1Q9NWF4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC30.77■■■□□ 2.52
SLC52A1Q9NWF4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC30.77■■■□□ 2.52
SLC52A1Q9NWF4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
SLC52A1Q9NWF4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
SLC52A1Q9NWF4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
SLC52A1Q9NWF4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC30.77■■■□□ 2.52
SLC52A1Q9NWF4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC30.77■■■□□ 2.52
SLC52A1Q9NWF4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC30.77■■■□□ 2.52
SLC52A1Q9NWF4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
SLC52A1Q9NWF4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
SLC52A1Q9NWF4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
SLC52A1Q9NWF4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC30.76■■■□□ 2.52
SLC52A1Q9NWF4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC30.76■■■□□ 2.51
SLC52A1Q9NWF4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC30.76■■■□□ 2.51
SLC52A1Q9NWF4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC30.76■■■□□ 2.51
SLC52A1Q9NWF4 AC137767.1-201ENST00000602918 1920 ntBASIC30.76■■■□□ 2.51
SLC52A1Q9NWF4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC30.76■■■□□ 2.51
SLC52A1Q9NWF4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SLC52A1Q9NWF4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC30.76■■■□□ 2.51
SLC52A1Q9NWF4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
SLC52A1Q9NWF4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SLC52A1Q9NWF4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SLC52A1Q9NWF4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SLC52A1Q9NWF4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC30.75■■■□□ 2.51
SLC52A1Q9NWF4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SLC52A1Q9NWF4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC30.75■■■□□ 2.51
SLC52A1Q9NWF4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC30.75■■■□□ 2.51
SLC52A1Q9NWF4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC30.75■■■□□ 2.51
SLC52A1Q9NWF4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SLC52A1Q9NWF4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SLC52A1Q9NWF4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC30.74■■■□□ 2.51
SLC52A1Q9NWF4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SLC52A1Q9NWF4 AC128676.1-201ENST00000454392 318 ntBASIC30.74■■■□□ 2.51
SLC52A1Q9NWF4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC30.74■■■□□ 2.51
SLC52A1Q9NWF4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
SLC52A1Q9NWF4 AC006058.3-201ENST00000606217 1069 ntBASIC30.74■■■□□ 2.51
SLC52A1Q9NWF4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC30.74■■■□□ 2.51
SLC52A1Q9NWF4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SLC52A1Q9NWF4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
SLC52A1Q9NWF4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SLC52A1Q9NWF4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SLC52A1Q9NWF4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SLC52A1Q9NWF4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SLC52A1Q9NWF4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC30.73■■■□□ 2.51
SLC52A1Q9NWF4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms