Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 KRT18P5-201ENST00000436075 1291 ntBASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 AC104564.3-201ENST00000582367 638 ntBASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM248Q9NWD8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.8■■□□□ 1.08
TMEM248Q9NWD8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM248Q9NWD8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
TMEM248Q9NWD8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.8■■□□□ 1.08
TMEM248Q9NWD8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.8■■□□□ 1.08
TMEM248Q9NWD8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
TMEM248Q9NWD8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.8■■□□□ 1.08
TMEM248Q9NWD8 AC053503.5-201ENST00000601508 636 ntBASIC21.8■■□□□ 1.08
TMEM248Q9NWD8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.8■■□□□ 1.08
TMEM248Q9NWD8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.8■■□□□ 1.08
TMEM248Q9NWD8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM248Q9NWD8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM248Q9NWD8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM248Q9NWD8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.8■■□□□ 1.08
TMEM248Q9NWD8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.8■■□□□ 1.08
TMEM248Q9NWD8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM248Q9NWD8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM248Q9NWD8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM248Q9NWD8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM248Q9NWD8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM248Q9NWD8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.79■■□□□ 1.08
TMEM248Q9NWD8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.79■■□□□ 1.08
TMEM248Q9NWD8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.79■■□□□ 1.08
TMEM248Q9NWD8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.79■■□□□ 1.08
TMEM248Q9NWD8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM248Q9NWD8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM248Q9NWD8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
TMEM248Q9NWD8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM248Q9NWD8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM248Q9NWD8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM248Q9NWD8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM248Q9NWD8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.78■■□□□ 1.08
TMEM248Q9NWD8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.78■■□□□ 1.08
TMEM248Q9NWD8 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.78■■□□□ 1.08
TMEM248Q9NWD8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM248Q9NWD8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM248Q9NWD8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM248Q9NWD8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM248Q9NWD8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM248Q9NWD8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM248Q9NWD8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM248Q9NWD8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM248Q9NWD8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
TMEM248Q9NWD8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
TMEM248Q9NWD8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM248Q9NWD8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TMEM248Q9NWD8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM248Q9NWD8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM248Q9NWD8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
TMEM248Q9NWD8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM248Q9NWD8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.77■■□□□ 1.08
TMEM248Q9NWD8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM248Q9NWD8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM248Q9NWD8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.77■■□□□ 1.08
TMEM248Q9NWD8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TMEM248Q9NWD8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM248Q9NWD8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM248Q9NWD8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM248Q9NWD8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM248Q9NWD8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM248Q9NWD8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
TMEM248Q9NWD8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
TMEM248Q9NWD8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM248Q9NWD8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.76■■□□□ 1.07
TMEM248Q9NWD8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
TMEM248Q9NWD8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM248Q9NWD8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM248Q9NWD8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TMEM248Q9NWD8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.76■■□□□ 1.07
TMEM248Q9NWD8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM248Q9NWD8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.76■■□□□ 1.07
TMEM248Q9NWD8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TMEM248Q9NWD8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.76■■□□□ 1.07
TMEM248Q9NWD8 AC104187.1-201ENST00000607510 612 ntBASIC21.76■■□□□ 1.07
TMEM248Q9NWD8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM248Q9NWD8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.75■■□□□ 1.07
TMEM248Q9NWD8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.75■■□□□ 1.07
TMEM248Q9NWD8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms