Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.57■□□□□ 0.72
UBQLN4Q9NRR5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.57■□□□□ 0.72
UBQLN4Q9NRR5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.57■□□□□ 0.72
UBQLN4Q9NRR5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.57■□□□□ 0.72
UBQLN4Q9NRR5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN4Q9NRR5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN4Q9NRR5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
UBQLN4Q9NRR5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN4Q9NRR5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN4Q9NRR5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN4Q9NRR5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN4Q9NRR5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN4Q9NRR5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
UBQLN4Q9NRR5 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN4Q9NRR5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN4Q9NRR5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.55■□□□□ 0.72
UBQLN4Q9NRR5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN4Q9NRR5 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN4Q9NRR5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.55■□□□□ 0.72
UBQLN4Q9NRR5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.55■□□□□ 0.72
UBQLN4Q9NRR5 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.55■□□□□ 0.72
UBQLN4Q9NRR5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN4Q9NRR5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN4Q9NRR5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN4Q9NRR5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN4Q9NRR5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN4Q9NRR5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
UBQLN4Q9NRR5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.55■□□□□ 0.72
UBQLN4Q9NRR5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.55■□□□□ 0.72
UBQLN4Q9NRR5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN4Q9NRR5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.54■□□□□ 0.72
UBQLN4Q9NRR5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN4Q9NRR5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.54■□□□□ 0.72
UBQLN4Q9NRR5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN4Q9NRR5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
UBQLN4Q9NRR5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.54■□□□□ 0.72
UBQLN4Q9NRR5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.54■□□□□ 0.72
UBQLN4Q9NRR5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.54■□□□□ 0.72
UBQLN4Q9NRR5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
UBQLN4Q9NRR5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN4Q9NRR5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN4Q9NRR5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN4Q9NRR5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.53■□□□□ 0.72
UBQLN4Q9NRR5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
UBQLN4Q9NRR5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN4Q9NRR5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN4Q9NRR5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN4Q9NRR5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.53■□□□□ 0.72
UBQLN4Q9NRR5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN4Q9NRR5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN4Q9NRR5 AC123595.1-201ENST00000440769 1046 ntBASIC19.53■□□□□ 0.72
UBQLN4Q9NRR5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.53■□□□□ 0.72
UBQLN4Q9NRR5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.53■□□□□ 0.72
UBQLN4Q9NRR5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN4Q9NRR5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN4Q9NRR5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
UBQLN4Q9NRR5 LINC02228-203ENST00000641970 1355 ntBASIC19.53■□□□□ 0.72
UBQLN4Q9NRR5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN4Q9NRR5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN4Q9NRR5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN4Q9NRR5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN4Q9NRR5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN4Q9NRR5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN4Q9NRR5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.52■□□□□ 0.72
UBQLN4Q9NRR5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN4Q9NRR5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.52■□□□□ 0.72
UBQLN4Q9NRR5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN4Q9NRR5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.52■□□□□ 0.71
UBQLN4Q9NRR5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN4Q9NRR5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.51■□□□□ 0.71
UBQLN4Q9NRR5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN4Q9NRR5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN4Q9NRR5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN4Q9NRR5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN4Q9NRR5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
UBQLN4Q9NRR5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
UBQLN4Q9NRR5 YBX1P1-201ENST00000445822 960 ntBASIC19.51■□□□□ 0.71
UBQLN4Q9NRR5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN4Q9NRR5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms