Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 LINC01521-201ENST00000504184 1943 ntBASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 AL157384.1-201ENST00000445995 2473 ntBASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42SE2Q9NRR3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42SE2Q9NRR3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CDC42SE2Q9NRR3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42SE2Q9NRR3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CDC42SE2Q9NRR3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.61□□□□□ -0.07
CDC42SE2Q9NRR3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42SE2Q9NRR3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42SE2Q9NRR3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42SE2Q9NRR3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42SE2Q9NRR3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42SE2Q9NRR3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42SE2Q9NRR3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.61□□□□□ -0.07
CDC42SE2Q9NRR3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.61□□□□□ -0.07
CDC42SE2Q9NRR3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.61□□□□□ -0.07
CDC42SE2Q9NRR3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42SE2Q9NRR3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42SE2Q9NRR3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42SE2Q9NRR3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.61□□□□□ -0.07
CDC42SE2Q9NRR3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42SE2Q9NRR3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CDC42SE2Q9NRR3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 AL049796.1-201ENST00000565336 1766 ntBASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 SRD5A1P1-201ENST00000442297 786 ntBASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 OR2A1-AS1-204ENST00000470435 602 ntBASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 MIR3621-201ENST00000580529 85 ntBASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42SE2Q9NRR3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 AP004607.7-201ENST00000527152 1677 ntBASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms