Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CTPS2Q9NRF8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTPS2Q9NRF8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.74■□□□□ 0.75
CTPS2Q9NRF8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTPS2Q9NRF8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.74■□□□□ 0.75
CTPS2Q9NRF8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTPS2Q9NRF8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CTPS2Q9NRF8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.74■□□□□ 0.75
CTPS2Q9NRF8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.74■□□□□ 0.75
CTPS2Q9NRF8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTPS2Q9NRF8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTPS2Q9NRF8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.74■□□□□ 0.75
CTPS2Q9NRF8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTPS2Q9NRF8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTPS2Q9NRF8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTPS2Q9NRF8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTPS2Q9NRF8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTPS2Q9NRF8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CTPS2Q9NRF8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.73■□□□□ 0.75
CTPS2Q9NRF8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.73■□□□□ 0.75
CTPS2Q9NRF8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.73■□□□□ 0.75
CTPS2Q9NRF8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.73■□□□□ 0.75
CTPS2Q9NRF8 AL139246.5-201ENST00000606645 996 ntBASIC19.73■□□□□ 0.75
CTPS2Q9NRF8 AC233992.3-201ENST00000607491 485 ntBASIC19.73■□□□□ 0.75
CTPS2Q9NRF8 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.73■□□□□ 0.75
CTPS2Q9NRF8 AC087239.1-201ENST00000622671 572 ntBASIC19.73■□□□□ 0.75
CTPS2Q9NRF8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.73■□□□□ 0.75
CTPS2Q9NRF8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.73■□□□□ 0.75
CTPS2Q9NRF8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTPS2Q9NRF8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTPS2Q9NRF8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.73■□□□□ 0.75
CTPS2Q9NRF8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTPS2Q9NRF8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CTPS2Q9NRF8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.73■□□□□ 0.75
CTPS2Q9NRF8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CTPS2Q9NRF8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTPS2Q9NRF8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTPS2Q9NRF8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTPS2Q9NRF8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CTPS2Q9NRF8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTPS2Q9NRF8 AC010141.3-201ENST00000456659 717 ntBASIC19.72■□□□□ 0.75
CTPS2Q9NRF8 AP005435.1-201ENST00000529293 1178 ntBASIC19.72■□□□□ 0.75
CTPS2Q9NRF8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
CTPS2Q9NRF8 AC008764.7-201ENST00000593779 1081 ntBASIC19.72■□□□□ 0.75
CTPS2Q9NRF8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTPS2Q9NRF8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTPS2Q9NRF8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CTPS2Q9NRF8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTPS2Q9NRF8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CTPS2Q9NRF8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTPS2Q9NRF8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTPS2Q9NRF8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.71■□□□□ 0.75
CTPS2Q9NRF8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTPS2Q9NRF8 EDA-201ENST00000338901 1233 ntBASIC19.71■□□□□ 0.75
CTPS2Q9NRF8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CTPS2Q9NRF8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTPS2Q9NRF8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.71■□□□□ 0.75
CTPS2Q9NRF8 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.71■□□□□ 0.75
CTPS2Q9NRF8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
CTPS2Q9NRF8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.71■□□□□ 0.75
CTPS2Q9NRF8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTPS2Q9NRF8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.71■□□□□ 0.75
CTPS2Q9NRF8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTPS2Q9NRF8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTPS2Q9NRF8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTPS2Q9NRF8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.7■□□□□ 0.74
CTPS2Q9NRF8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.7■□□□□ 0.74
CTPS2Q9NRF8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.7■□□□□ 0.74
CTPS2Q9NRF8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.7■□□□□ 0.74
CTPS2Q9NRF8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
CTPS2Q9NRF8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTPS2Q9NRF8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTPS2Q9NRF8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTPS2Q9NRF8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTPS2Q9NRF8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CTPS2Q9NRF8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTPS2Q9NRF8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTPS2Q9NRF8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CTPS2Q9NRF8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTPS2Q9NRF8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.69■□□□□ 0.74
CTPS2Q9NRF8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CTPS2Q9NRF8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTPS2Q9NRF8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.69■□□□□ 0.74
CTPS2Q9NRF8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CTPS2Q9NRF8 AC126544.1-201ENST00000580842 1059 ntBASIC19.69■□□□□ 0.74
CTPS2Q9NRF8 AL355001.2-201ENST00000620617 1191 ntBASIC19.69■□□□□ 0.74
CTPS2Q9NRF8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTPS2Q9NRF8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.69■□□□□ 0.74
CTPS2Q9NRF8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTPS2Q9NRF8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.69■□□□□ 0.74
CTPS2Q9NRF8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.69■□□□□ 0.74
CTPS2Q9NRF8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.68■□□□□ 0.74
CTPS2Q9NRF8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.68■□□□□ 0.74
CTPS2Q9NRF8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.68■□□□□ 0.74
CTPS2Q9NRF8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CTPS2Q9NRF8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTPS2Q9NRF8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.68■□□□□ 0.74
CTPS2Q9NRF8 AC099791.1-201ENST00000416440 715 ntBASIC19.68■□□□□ 0.74
CTPS2Q9NRF8 AP001330.3-201ENST00000520123 633 ntBASIC19.68■□□□□ 0.74
CTPS2Q9NRF8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms