Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM9Q9NQV7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM9Q9NQV7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PRDM9Q9NQV7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PRDM9Q9NQV7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM9Q9NQV7 AC010542.4-201ENST00000563151 1910 ntBASIC20.12■□□□□ 0.81
PRDM9Q9NQV7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM9Q9NQV7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PRDM9Q9NQV7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM9Q9NQV7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
PRDM9Q9NQV7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM9Q9NQV7 AC055733.4-201ENST00000638462 1354 ntBASIC20.11■□□□□ 0.81
PRDM9Q9NQV7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.11■□□□□ 0.81
PRDM9Q9NQV7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.11■□□□□ 0.81
PRDM9Q9NQV7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM9Q9NQV7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM9Q9NQV7 LINC00565-201ENST00000562710 2331 ntBASIC20.11■□□□□ 0.81
PRDM9Q9NQV7 AC244015.2-201ENST00000616358 1861 ntBASIC20.11■□□□□ 0.81
PRDM9Q9NQV7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
PRDM9Q9NQV7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.11■□□□□ 0.81
PRDM9Q9NQV7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PRDM9Q9NQV7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PRDM9Q9NQV7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PRDM9Q9NQV7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.1■□□□□ 0.81
PRDM9Q9NQV7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.1■□□□□ 0.81
PRDM9Q9NQV7 AC079140.4-201ENST00000507448 529 ntBASIC20.1■□□□□ 0.81
PRDM9Q9NQV7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PRDM9Q9NQV7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.1■□□□□ 0.81
PRDM9Q9NQV7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PRDM9Q9NQV7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PRDM9Q9NQV7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRDM9Q9NQV7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRDM9Q9NQV7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PRDM9Q9NQV7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRDM9Q9NQV7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PRDM9Q9NQV7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PRDM9Q9NQV7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.09■□□□□ 0.81
PRDM9Q9NQV7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRDM9Q9NQV7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PRDM9Q9NQV7 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.09■□□□□ 0.81
PRDM9Q9NQV7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRDM9Q9NQV7 AL162430.1-201ENST00000480705 870 ntBASIC20.09■□□□□ 0.81
PRDM9Q9NQV7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRDM9Q9NQV7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRDM9Q9NQV7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.09■□□□□ 0.81
PRDM9Q9NQV7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRDM9Q9NQV7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
PRDM9Q9NQV7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PRDM9Q9NQV7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
PRDM9Q9NQV7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.09■□□□□ 0.81
PRDM9Q9NQV7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PRDM9Q9NQV7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PRDM9Q9NQV7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.08■□□□□ 0.81
PRDM9Q9NQV7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PRDM9Q9NQV7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PRDM9Q9NQV7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.08■□□□□ 0.81
PRDM9Q9NQV7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
PRDM9Q9NQV7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PRDM9Q9NQV7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
PRDM9Q9NQV7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRDM9Q9NQV7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.08■□□□□ 0.8
PRDM9Q9NQV7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PRDM9Q9NQV7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRDM9Q9NQV7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRDM9Q9NQV7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.07■□□□□ 0.8
PRDM9Q9NQV7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRDM9Q9NQV7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRDM9Q9NQV7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRDM9Q9NQV7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.07■□□□□ 0.8
PRDM9Q9NQV7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.07■□□□□ 0.8
PRDM9Q9NQV7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.07■□□□□ 0.8
PRDM9Q9NQV7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PRDM9Q9NQV7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.07■□□□□ 0.8
PRDM9Q9NQV7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRDM9Q9NQV7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 AC003102.1-202ENST00000563394 1796 ntBASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 KRT18P5-201ENST00000436075 1291 ntBASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 NTF6G-201ENST00000591094 616 ntBASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM9Q9NQV7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PRDM9Q9NQV7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.05■□□□□ 0.8
PRDM9Q9NQV7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms