Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
KCNMB3Q9NPA1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
KCNMB3Q9NPA1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
KCNMB3Q9NPA1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
KCNMB3Q9NPA1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
KCNMB3Q9NPA1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
KCNMB3Q9NPA1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.01■■□□□ 1.43
KCNMB3Q9NPA1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.01■■□□□ 1.43
KCNMB3Q9NPA1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.01■■□□□ 1.43
KCNMB3Q9NPA1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
KCNMB3Q9NPA1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
KCNMB3Q9NPA1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.01■■□□□ 1.43
KCNMB3Q9NPA1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
KCNMB3Q9NPA1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
KCNMB3Q9NPA1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24■■□□□ 1.43
KCNMB3Q9NPA1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
KCNMB3Q9NPA1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
KCNMB3Q9NPA1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC24■■□□□ 1.43
KCNMB3Q9NPA1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24■■□□□ 1.43
KCNMB3Q9NPA1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24■■□□□ 1.43
KCNMB3Q9NPA1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24■■□□□ 1.43
KCNMB3Q9NPA1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
KCNMB3Q9NPA1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
KCNMB3Q9NPA1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
KCNMB3Q9NPA1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
KCNMB3Q9NPA1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.99■■□□□ 1.43
KCNMB3Q9NPA1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.99■■□□□ 1.43
KCNMB3Q9NPA1 AC053503.5-201ENST00000601508 636 ntBASIC23.99■■□□□ 1.43
KCNMB3Q9NPA1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.99■■□□□ 1.43
KCNMB3Q9NPA1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
KCNMB3Q9NPA1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
KCNMB3Q9NPA1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
KCNMB3Q9NPA1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.99■■□□□ 1.43
KCNMB3Q9NPA1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
KCNMB3Q9NPA1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.99■■□□□ 1.43
KCNMB3Q9NPA1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KCNMB3Q9NPA1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
KCNMB3Q9NPA1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
KCNMB3Q9NPA1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
KCNMB3Q9NPA1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KCNMB3Q9NPA1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.98■■□□□ 1.43
KCNMB3Q9NPA1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.98■■□□□ 1.43
KCNMB3Q9NPA1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.98■■□□□ 1.43
KCNMB3Q9NPA1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.98■■□□□ 1.43
KCNMB3Q9NPA1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KCNMB3Q9NPA1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
KCNMB3Q9NPA1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KCNMB3Q9NPA1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KCNMB3Q9NPA1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
KCNMB3Q9NPA1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
KCNMB3Q9NPA1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
KCNMB3Q9NPA1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
KCNMB3Q9NPA1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
KCNMB3Q9NPA1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
KCNMB3Q9NPA1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.97■■□□□ 1.43
KCNMB3Q9NPA1 AC104187.1-201ENST00000607510 612 ntBASIC23.97■■□□□ 1.43
KCNMB3Q9NPA1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
KCNMB3Q9NPA1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.96■■□□□ 1.43
KCNMB3Q9NPA1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
KCNMB3Q9NPA1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
KCNMB3Q9NPA1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
KCNMB3Q9NPA1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
KCNMB3Q9NPA1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.95■■□□□ 1.42
KCNMB3Q9NPA1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.95■■□□□ 1.42
KCNMB3Q9NPA1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
KCNMB3Q9NPA1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.95■■□□□ 1.42
KCNMB3Q9NPA1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KCNMB3Q9NPA1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
KCNMB3Q9NPA1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
KCNMB3Q9NPA1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
KCNMB3Q9NPA1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KCNMB3Q9NPA1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.95■■□□□ 1.42
KCNMB3Q9NPA1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
KCNMB3Q9NPA1 CLDN5-201ENST00000403084 2357 ntBASIC23.94■■□□□ 1.42
KCNMB3Q9NPA1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
KCNMB3Q9NPA1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KCNMB3Q9NPA1 AC138907.5-202ENST00000569484 235 ntBASIC23.94■■□□□ 1.42
KCNMB3Q9NPA1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
KCNMB3Q9NPA1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KCNMB3Q9NPA1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms