Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRTM1Q9HBL6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.42■□□□□ 0.86
LRTM1Q9HBL6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRTM1Q9HBL6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRTM1Q9HBL6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRTM1Q9HBL6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRTM1Q9HBL6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRTM1Q9HBL6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRTM1Q9HBL6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.41■□□□□ 0.86
LRTM1Q9HBL6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.41■□□□□ 0.86
LRTM1Q9HBL6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LRTM1Q9HBL6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LRTM1Q9HBL6 BX842568.3-201ENST00000418104 571 ntBASIC20.41■□□□□ 0.86
LRTM1Q9HBL6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.41■□□□□ 0.86
LRTM1Q9HBL6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRTM1Q9HBL6 MIR4767-201ENST00000582827 78 ntBASIC20.41■□□□□ 0.86
LRTM1Q9HBL6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRTM1Q9HBL6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.41■□□□□ 0.86
LRTM1Q9HBL6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.41■□□□□ 0.86
LRTM1Q9HBL6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRTM1Q9HBL6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRTM1Q9HBL6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRTM1Q9HBL6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRTM1Q9HBL6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRTM1Q9HBL6 UNC93B3-201ENST00000308076 687 ntBASIC20.4■□□□□ 0.86
LRTM1Q9HBL6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRTM1Q9HBL6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LRTM1Q9HBL6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRTM1Q9HBL6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.4■□□□□ 0.86
LRTM1Q9HBL6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRTM1Q9HBL6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRTM1Q9HBL6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRTM1Q9HBL6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.4■□□□□ 0.86
LRTM1Q9HBL6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRTM1Q9HBL6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRTM1Q9HBL6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LRTM1Q9HBL6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
LRTM1Q9HBL6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
LRTM1Q9HBL6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRTM1Q9HBL6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.39■□□□□ 0.86
LRTM1Q9HBL6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRTM1Q9HBL6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRTM1Q9HBL6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRTM1Q9HBL6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRTM1Q9HBL6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
LRTM1Q9HBL6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRTM1Q9HBL6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.39■□□□□ 0.85
LRTM1Q9HBL6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.39■□□□□ 0.85
LRTM1Q9HBL6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
LRTM1Q9HBL6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.39■□□□□ 0.85
LRTM1Q9HBL6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRTM1Q9HBL6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRTM1Q9HBL6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRTM1Q9HBL6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRTM1Q9HBL6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRTM1Q9HBL6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRTM1Q9HBL6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRTM1Q9HBL6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRTM1Q9HBL6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.39■□□□□ 0.85
LRTM1Q9HBL6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.38■□□□□ 0.85
LRTM1Q9HBL6 AP006587.3-201ENST00000525742 1516 ntBASIC20.38■□□□□ 0.85
LRTM1Q9HBL6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
LRTM1Q9HBL6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRTM1Q9HBL6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRTM1Q9HBL6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.38■□□□□ 0.85
LRTM1Q9HBL6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRTM1Q9HBL6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRTM1Q9HBL6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.38■□□□□ 0.85
LRTM1Q9HBL6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.38■□□□□ 0.85
LRTM1Q9HBL6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRTM1Q9HBL6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.38■□□□□ 0.85
LRTM1Q9HBL6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.38■□□□□ 0.85
LRTM1Q9HBL6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LRTM1Q9HBL6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.38■□□□□ 0.85
LRTM1Q9HBL6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRTM1Q9HBL6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRTM1Q9HBL6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LRTM1Q9HBL6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LRTM1Q9HBL6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRTM1Q9HBL6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 SMUG1P1-201ENST00000590640 811 ntBASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 AC233992.3-201ENST00000607491 485 ntBASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms