Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SP110Q9HB58 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SP110Q9HB58 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SP110Q9HB58 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SP110Q9HB58 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.78■■□□□ 1.08
SP110Q9HB58 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SP110Q9HB58 AC010542.4-201ENST00000563151 1910 ntBASIC21.78■■□□□ 1.08
SP110Q9HB58 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SP110Q9HB58 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SP110Q9HB58 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
SP110Q9HB58 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.77■■□□□ 1.08
SP110Q9HB58 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SP110Q9HB58 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SP110Q9HB58 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SP110Q9HB58 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SP110Q9HB58 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.77■■□□□ 1.08
SP110Q9HB58 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SP110Q9HB58 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
SP110Q9HB58 AC079140.4-201ENST00000507448 529 ntBASIC21.77■■□□□ 1.08
SP110Q9HB58 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.77■■□□□ 1.08
SP110Q9HB58 CCDC92B-201ENST00000575506 885 ntBASIC21.77■■□□□ 1.08
SP110Q9HB58 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.77■■□□□ 1.08
SP110Q9HB58 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SP110Q9HB58 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SP110Q9HB58 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SP110Q9HB58 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SP110Q9HB58 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SP110Q9HB58 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.07
SP110Q9HB58 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
SP110Q9HB58 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SP110Q9HB58 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.76■■□□□ 1.07
SP110Q9HB58 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SP110Q9HB58 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SP110Q9HB58 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SP110Q9HB58 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SP110Q9HB58 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.76■■□□□ 1.07
SP110Q9HB58 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SP110Q9HB58 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SP110Q9HB58 AC097381.1-201ENST00000429019 1296 ntBASIC21.76■■□□□ 1.07
SP110Q9HB58 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.76■■□□□ 1.07
SP110Q9HB58 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.76■■□□□ 1.07
SP110Q9HB58 RARRES2P6-201ENST00000567333 442 ntBASIC21.76■■□□□ 1.07
SP110Q9HB58 TERF1P2-201ENST00000583350 1212 ntBASIC21.76■■□□□ 1.07
SP110Q9HB58 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SP110Q9HB58 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.76■■□□□ 1.07
SP110Q9HB58 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.76■■□□□ 1.07
SP110Q9HB58 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.76■■□□□ 1.07
SP110Q9HB58 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SP110Q9HB58 AC003102.1-202ENST00000563394 1796 ntBASIC21.76■■□□□ 1.07
SP110Q9HB58 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SP110Q9HB58 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SP110Q9HB58 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SP110Q9HB58 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SP110Q9HB58 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SP110Q9HB58 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SP110Q9HB58 FBXW4P1-201ENST00000426721 2239 ntBASIC21.75■■□□□ 1.07
SP110Q9HB58 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SP110Q9HB58 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SP110Q9HB58 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SP110Q9HB58 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SP110Q9HB58 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SP110Q9HB58 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SP110Q9HB58 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SP110Q9HB58 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.75■■□□□ 1.07
SP110Q9HB58 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SP110Q9HB58 KRT18P14-201ENST00000534205 1250 ntBASIC21.75■■□□□ 1.07
SP110Q9HB58 AC104564.3-201ENST00000582367 638 ntBASIC21.75■■□□□ 1.07
SP110Q9HB58 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.75■■□□□ 1.07
SP110Q9HB58 MIR6821-201ENST00000617625 74 ntBASIC21.75■■□□□ 1.07
SP110Q9HB58 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.75■■□□□ 1.07
SP110Q9HB58 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SP110Q9HB58 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SP110Q9HB58 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.75■■□□□ 1.07
SP110Q9HB58 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SP110Q9HB58 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.75■■□□□ 1.07
SP110Q9HB58 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.75■■□□□ 1.07
SP110Q9HB58 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.75■■□□□ 1.07
SP110Q9HB58 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SP110Q9HB58 LINC00565-201ENST00000562710 2331 ntBASIC21.74■■□□□ 1.07
SP110Q9HB58 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SP110Q9HB58 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SP110Q9HB58 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SP110Q9HB58 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.74■■□□□ 1.07
SP110Q9HB58 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.74■■□□□ 1.07
SP110Q9HB58 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SP110Q9HB58 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.73■■□□□ 1.07
SP110Q9HB58 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SP110Q9HB58 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
SP110Q9HB58 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SP110Q9HB58 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.73■■□□□ 1.07
SP110Q9HB58 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.73■■□□□ 1.07
SP110Q9HB58 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.73■■□□□ 1.07
SP110Q9HB58 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.73■■□□□ 1.07
SP110Q9HB58 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SP110Q9HB58 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SP110Q9HB58 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.73■■□□□ 1.07
SP110Q9HB58 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SP110Q9HB58 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SP110Q9HB58 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SP110Q9HB58 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms